RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ECE1P42892 770 aa19.26■□□□□ 0.67
RAB40C-208ENST00000564703 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
RAB40C-208ENST00000564703 HHIPL1Q96JK4 782 aa19.26■□□□□ 0.67
RAB40C-208ENST00000564703 DOCK2Q92608 1830 aa19.25■□□□□ 0.67
RAB40C-208ENST00000564703 MAPKAPK5Q8IW41 473 aa19.25■□□□□ 0.67
RAB40C-208ENST00000564703 ZFPM1Q8IX07 1006 aa19.25■□□□□ 0.67
RAB40C-208ENST00000564703 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
RAB40C-208ENST00000564703 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
RAB40C-208ENST00000564703 DHX36Q9H2U1 1008 aaKnown RBP19.25■□□□□ 0.67
RAB40C-208ENST00000564703 DDX4Q9NQI0 724 aaKnown RBP19.25■□□□□ 0.67
RAB40C-208ENST00000564703 MAST2Q6P0Q8 1798 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-208ENST00000564703 ZNF157P51786 506 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-208ENST00000564703 GRM1Q13255 1194 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 RGMBQ6NW40 437 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 MOB2Q70IA6 237 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 MIGA2Q7L4E1 593 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 TICAM2Q86XR7 235 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 APPBP2Q92624 585 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 CCDC102AQ96A19 550 aa19.24■□□□□ 0.67
RAB40C-208ENST00000564703 RIOK1Q9BRS2 568 aaKnown RBP19.24■□□□□ 0.67
RAB40C-208ENST00000564703 OSBPL5Q9H0X9 879 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-208ENST00000564703 RPAP1Q9BWH6 1393 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-208ENST00000564703 UNCXA6NJT0 531 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 MBD4O95243 580 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 PDE4AP27815 886 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 SLFNL1Q499Z3 407 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 SLC10A4Q96EP9 437 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 ARMT1Q9H993 441 aa19.23■□□□□ 0.67
RAB40C-208ENST00000564703 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-208ENST00000564703 DDTLA6NHG4 134 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-208ENST00000564703 MAP3K11Q16584 847 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 CDAN1Q8IWY9 1227 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 ANKRD13AQ8IZ07 590 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 ZNF341Q9BYN7 854 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
RAB40C-208ENST00000564703 PI4KBQ9UBF8 816 aa19.22■□□□□ 0.67
RAB40C-208ENST00000564703 HLA-DOAP06340 250 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 MAP3K9P80192 1104 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 CYP4F22Q6NT55 531 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 TTC6Q86TZ1 520 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-208ENST00000564703 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 DNAJC5GQ8N7S2 189 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 KLRG1Q96E93 195 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 FZD1Q9UP38 647 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 CSADQ9Y600 493 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 SLC4A4Q9Y6R1 1079 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 MYH7P12883 1935 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 FLT1P17948 1338 aa19.21■□□□□ 0.67
RAB40C-208ENST00000564703 PAPPA2Q9BXP8 1791 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 CHGBP05060 677 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 POLR3DP05423 398 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-208ENST00000564703 GNAT2P19087 354 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 VEGFBP49765 207 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 LDLRAD1Q5T700 205 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 SH3BP5LQ7L8J4 393 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 AMOTL1Q8IY63 956 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 OSBP2Q969R2 916 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.2■□□□□ 0.66
RAB40C-208ENST00000564703 ATP8A2Q9NTI2 1148 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 SAP30BPQ9UHR5 308 aaKnown RBP19.2■□□□□ 0.66
RAB40C-208ENST00000564703 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
RAB40C-208ENST00000564703 WDR33Q9C0J8 1336 aaKnown RBP19.2■□□□□ 0.66
RAB40C-208ENST00000564703 HIP1O00291 1037 aa19.19■□□□□ 0.66
RAB40C-208ENST00000564703 TTC22Q5TAA0 569 aa19.19■□□□□ 0.66
RAB40C-208ENST00000564703 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-208ENST00000564703 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
RAB40C-208ENST00000564703 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
RAB40C-208ENST00000564703 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
RAB40C-208ENST00000564703 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
RAB40C-208ENST00000564703 TBC1D12O60347 775 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 APPP05067 770 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 ZMYM1Q5SVZ6 1142 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 SDR42E1Q8WUS8 393 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 HELLSQ9NRZ9 838 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 HERC5Q9UII4 1024 aaKnown RBP19.18■□□□□ 0.66
RAB40C-208ENST00000564703 ATRNL1Q5VV63 1379 aa19.18■□□□□ 0.66
RAB40C-208ENST00000564703 PRKAB2O43741 272 aa19.17■□□□□ 0.66
RAB40C-208ENST00000564703 SDSP20132 328 aa19.17■□□□□ 0.66
RAB40C-208ENST00000564703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.17■□□□□ 0.66
RAB40C-208ENST00000564703 DCP1AQ9NPI6 582 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-208ENST00000564703 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
RAB40C-208ENST00000564703 GPAA1O43292 621 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 MAP2K2P36507 400 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 MAP3K10Q02779 954 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 NOGQ13253 232 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
RAB40C-208ENST00000564703 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-208ENST00000564703 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
RAB40C-208ENST00000564703 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
RAB40C-208ENST00000564703 MFAP1P55081 439 aaKnown RBP19.15■□□□□ 0.66
RAB40C-208ENST00000564703 SLC4A8Q2Y0W8 1093 aa19.15■□□□□ 0.66
RAB40C-208ENST00000564703 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-208ENST00000564703 ZKSCAN4Q969J2 545 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-208ENST00000564703 CLMNQ96JQ2 1002 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms