RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 H3BQV1 296 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 PDIA3P30101 505 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 PHKA1P46020 1223 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 RC3H1Q5TC82 1133 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 FBXO33Q7Z6M2 555 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 NSUN7Q8NE18 718 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 KIF12Q96FN5 646 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 CFAP45Q9UL16 551 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 CNTNAP4Q9C0A0 1308 aa8.5□□□□□ -1.05
HERPUD1-209ENST00000564678 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 TRDNQ13061 729 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 SF3B3Q15393 1217 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 TTLL5Q6EMB2 1281 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 SPATA5Q8NB90 893 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 LRRC2Q9BYS8 371 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 COL5A3P25940 1745 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 SALL1Q9NSC2 1324 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 LAMB2P55268 1798 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 TCRBV5S4A2TA0A5A2 114 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 ESPNB1AK53 854 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 KCNQ2O43526 872 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 JAK2O60674 1132 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 PDE6AP16499 860 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 SLC10A5Q5PT55 438 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 TTC6Q86TZ1 520 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 FBXO41Q8TF61 875 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 VTI1AQ96AJ9 217 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-209ENST00000564678 ZNF532Q9HCE3 1301 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 BCL9LQ86UU0 1499 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 GOLGA6L4A6NEF3 574 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 GNAT2P19087 354 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 RESTQ13127 1097 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 FAM98CQ17RN3 349 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 AIDAQ96BJ3 306 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 STRBPQ96SI9 672 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 PIH1D3Q9NQM4 214 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 SEC31BQ9NQW1 1179 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 KLHL42Q9P2K6 505 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 A0A0G2JLW4 131 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 PTPDC1A2A3K4 754 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 PRC1O43663 620 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 LILRB3O75022 631 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 CLSTN1O94985 981 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 LEO1Q8WVC0 666 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 NYXQ9GZU5 481 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 BSDC1Q9NW68 430 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 BCORQ6W2J9 1755 aa8.48□□□□□ -1.05
HERPUD1-209ENST00000564678 SPTLC1O15269 473 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 RPS6KA4O75676 772 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 NDUFV2P19404 249 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 CCT2P78371 535 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 CHRNDQ07001 517 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 RASGRF1Q13972 1273 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 CERKQ8TCT0 537 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 TMEM87BQ96K49 555 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 MTA3Q9BTC8 594 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 RRAGDQ9NQL2 400 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 DDX19AQ9NUU7 478 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 SPATA31A6Q5VVP1 1343 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 PNPLA7Q6ZV29 1317 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
HERPUD1-209ENST00000564678 FAM177BA6PVY3 158 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 HAND2P61296 217 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 ANKRD18AQ8IVF6 992 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 LINC00116Q8NCU8 138 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 DDX11Q96FC9 970 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 FUCA2Q9BTY2 467 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 NARFQ9UHQ1 456 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 RCOR1Q9UKL0 485 aa8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 MYO5AQ9Y4I1 1855 aaKnown RBP8.46□□□□□ -1.05
HERPUD1-209ENST00000564678 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 APPP05067 770 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 CHST3Q7LGC8 479 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms