RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
CNOT1-206ENST00000564557 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
CNOT1-206ENST00000564557 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
CNOT1-206ENST00000564557 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
CNOT1-206ENST00000564557 PIH1D3Q9NQM4 214 aaKnown RBP16.63■□□□□ 0.25
CNOT1-206ENST00000564557 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
CNOT1-206ENST00000564557 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
CNOT1-206ENST00000564557 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-206ENST00000564557 TRPA1O75762 1119 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 CYP7A1P22680 504 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 INHBEP58166 350 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 COL13A1Q5TAT6 717 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-206ENST00000564557 TEX11Q8IYF3 940 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
CNOT1-206ENST00000564557 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CNOT1-206ENST00000564557 AATFQ9NY61 560 aaKnown RBP eCLIP16.62■□□□□ 0.25
CNOT1-206ENST00000564557 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-206ENST00000564557 AAMPQ13685 434 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
CNOT1-206ENST00000564557 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 RNF186Q9NXI6 227 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 SAGE1Q9NXZ1 904 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
CNOT1-206ENST00000564557 AKAP11Q9UKA4 1901 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 PCNTO95613 3336 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-206ENST00000564557 TM4SF4P48230 202 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 RHBDL3P58872 404 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 VGLL4Q14135 290 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-206ENST00000564557 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-206ENST00000564557 CERS3Q8IU89 383 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 ZFPM1Q8IX07 1006 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
CNOT1-206ENST00000564557 GOLIM4O00461 696 aa16.59■□□□□ 0.25
CNOT1-206ENST00000564557 ALDH1A1P00352 501 aa16.59■□□□□ 0.25
CNOT1-206ENST00000564557 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
CNOT1-206ENST00000564557 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
CNOT1-206ENST00000564557 ATP5JP18859 108 aa16.58■□□□□ 0.24
CNOT1-206ENST00000564557 PPP4CP60510 307 aa16.58■□□□□ 0.24
CNOT1-206ENST00000564557 ERO1BQ86YB8 467 aa16.58■□□□□ 0.24
CNOT1-206ENST00000564557 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CNOT1-206ENST00000564557 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
CNOT1-206ENST00000564557 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
CNOT1-206ENST00000564557 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
CNOT1-206ENST00000564557 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
CNOT1-206ENST00000564557 GTF2A2P52657 109 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■■□ 19.3
CNOT1-206ENST00000564557 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
CNOT1-206ENST00000564557 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
CNOT1-206ENST00000564557 USP5P45974 858 aa16.56■□□□□ 0.24
CNOT1-206ENST00000564557 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
CNOT1-206ENST00000564557 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
CNOT1-206ENST00000564557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
CNOT1-206ENST00000564557 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
CNOT1-206ENST00000564557 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
CNOT1-206ENST00000564557 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 INPP5BP32019 993 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
CNOT1-206ENST00000564557 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 ADGRA1Q86SQ6 560 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 IFNL1Q8IU54 200 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 HAUS7Q99871 368 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
CNOT1-206ENST00000564557 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 PDE6AP16499 860 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 GJA5P36382 358 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 PPATQ06203 517 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 CCL15Q16663 113 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 CRACR2BQ8N4Y2 399 aaPredicted RBP16.54■□□□□ 0.24
CNOT1-206ENST00000564557 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 RWDD1Q9H446 243 aaPredicted RBP16.54■□□□□ 0.24
CNOT1-206ENST00000564557 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
CNOT1-206ENST00000564557 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
CNOT1-206ENST00000564557 ZNF532Q9HCE3 1301 aa16.53■□□□□ 0.24
CNOT1-206ENST00000564557 ERC2O15083 957 aa16.53■□□□□ 0.24
CNOT1-206ENST00000564557 TBC1D12O60347 775 aa16.53■□□□□ 0.24
CNOT1-206ENST00000564557 CETPP11597 493 aa16.53■□□□□ 0.24
CNOT1-206ENST00000564557 PPIL2Q13356 520 aa16.53■□□□□ 0.24
CNOT1-206ENST00000564557 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
CNOT1-206ENST00000564557 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms