RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 AIDAQ96BJ3 306 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 ATP8A2Q9NTI2 1148 aa20.1■□□□□ 0.81
RNF40-206ENST00000564260 SSC5DA1L4H1 1573 aa20.09■□□□□ 0.81
RNF40-206ENST00000564260 GIMAP6Q6P9H5 292 aa20.09■□□□□ 0.81
RNF40-206ENST00000564260 CSRNP1Q96S65 589 aa20.09■□□□□ 0.81
RNF40-206ENST00000564260 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
RNF40-206ENST00000564260 HERC5Q9UII4 1024 aaKnown RBP20.09■□□□□ 0.81
RNF40-206ENST00000564260 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 USP5P45974 858 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 HUNKP57058 714 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.81
RNF40-206ENST00000564260 TCP10Q12799 353 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 PICALMQ13492 652 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 DEFB115Q30KQ5 88 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 ZMYM1Q5SVZ6 1142 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 LDLRAD1Q5T700 205 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 TTC22Q5TAA0 569 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 CCDC102AQ96A19 550 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 PI4KBQ9UBF8 816 aa20.08■□□□□ 0.81
RNF40-206ENST00000564260 SCAF8Q9UPN6 1271 aaKnown RBP20.08■□□□□ 0.81
RNF40-206ENST00000564260 MBD4O95243 580 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 HLA-DOAP06340 250 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 DYNLL1P63167 89 aaKnown RBP20.07■□□□□ 0.8
RNF40-206ENST00000564260 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 METTL16Q86W50 562 aaKnown RBP20.07■□□□□ 0.8
RNF40-206ENST00000564260 ZSCAN29Q8IWY8 852 aaPredicted RBP20.07■□□□□ 0.8
RNF40-206ENST00000564260 ANKRD13AQ8IZ07 590 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 ZNF341Q9BYN7 854 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 HELLSQ9NRZ9 838 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
RNF40-206ENST00000564260 MYH7P12883 1935 aa20.07■□□□□ 0.8
RNF40-206ENST00000564260 MYO5AQ9Y4I1 1855 aaKnown RBP20.07■□□□□ 0.8
RNF40-206ENST00000564260 TTLL12Q14166 644 aaPredicted RBP20.06■□□□□ 0.8
RNF40-206ENST00000564260 RGMBQ6NW40 437 aa20.06■□□□□ 0.8
RNF40-206ENST00000564260 DLK2Q6UY11 383 aa20.06■□□□□ 0.8
RNF40-206ENST00000564260 TTC6Q86TZ1 520 aa20.06■□□□□ 0.8
RNF40-206ENST00000564260 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
RNF40-206ENST00000564260 PUS7LQ9H0K6 701 aaKnown RBP20.06■□□□□ 0.8
RNF40-206ENST00000564260 EHD4Q9H223 541 aa20.06■□□□□ 0.8
RNF40-206ENST00000564260 MFAP1P55081 439 aaKnown RBP20.05■□□□□ 0.8
RNF40-206ENST00000564260 AMOTL1Q8IY63 956 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 REM2Q8IYK8 340 aaPredicted RBP20.05■□□□□ 0.8
RNF40-206ENST00000564260 LCORLQ8N3X6 602 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.05■□□□□ 0.8
RNF40-206ENST00000564260 OSBP2Q969R2 916 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 KLRG1Q96E93 195 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 STRBPQ96SI9 672 aaKnown RBP20.05■□□□□ 0.8
RNF40-206ENST00000564260 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
RNF40-206ENST00000564260 ANGEL1Q9UNK9 670 aaKnown RBP20.05■□□□□ 0.8
RNF40-206ENST00000564260 FOCADQ5VW36 1801 aa20.04■□□□□ 0.8
RNF40-206ENST00000564260 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
RNF40-206ENST00000564260 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
RNF40-206ENST00000564260 ZFPM1Q8IX07 1006 aa20.04■□□□□ 0.8
RNF40-206ENST00000564260 DCP1AQ9NPI6 582 aaPredicted RBP20.04■□□□□ 0.8
RNF40-206ENST00000564260 GINM1Q9NU53 330 aa20.04■□□□□ 0.8
RNF40-206ENST00000564260 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
RNF40-206ENST00000564260 GPAA1O43292 621 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 MAP3K9P80192 1104 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 NOGQ13253 232 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 DNAJC5GQ8N7S2 189 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 ARMT1Q9H993 441 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 CSADQ9Y600 493 aa20.03■□□□□ 0.8
RNF40-206ENST00000564260 GSPT1P15170 499 aaKnown RBP20.02■□□□□ 0.8
RNF40-206ENST00000564260 SDSP20132 328 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 MAP2K2P36507 400 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 BMP2KLQ5H9B9 411 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 NOL9Q5SY16 702 aaKnown RBP20.02■□□□□ 0.8
RNF40-206ENST00000564260 CDAN1Q8IWY9 1227 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 NACAP1Q9BZK3 213 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 ARPP21Q9UBL0 812 aaPredicted RBP20.02■□□□□ 0.8
RNF40-206ENST00000564260 SLC4A4Q9Y6R1 1079 aa20.02■□□□□ 0.8
RNF40-206ENST00000564260 SLC10A3P09131 477 aa20.01■□□□□ 0.79
RNF40-206ENST00000564260 ZBTB48P10074 688 aaPredicted RBP20.01■□□□□ 0.79
RNF40-206ENST00000564260 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
RNF40-206ENST00000564260 WRNIP1Q96S55 665 aa20.01■□□□□ 0.79
RNF40-206ENST00000564260 SERPINB13Q9UIV8 391 aa20.01■□□□□ 0.79
RNF40-206ENST00000564260 CEP350Q5VT06 3117 aa20.01■□□□□ 0.79
RNF40-206ENST00000564260 RAD50Q92878 1312 aa20.01■□□□□ 0.79
RNF40-206ENST00000564260 PATL2C9JE40 543 aaKnown RBP20■□□□□ 0.79
RNF40-206ENST00000564260 UBE2Q2LH0YL09 131 aa20■□□□□ 0.79
RNF40-206ENST00000564260 CTNND1O60716 968 aaKnown RBP20■□□□□ 0.79
RNF40-206ENST00000564260 SBK1Q52WX2 424 aa20■□□□□ 0.79
RNF40-206ENST00000564260 CAPNS2Q96L46 248 aa20■□□□□ 0.79
RNF40-206ENST00000564260 TRIM34Q9BYJ4 488 aa20■□□□□ 0.79
RNF40-206ENST00000564260 TBC1D2Q9BYX2 928 aa20■□□□□ 0.79
RNF40-206ENST00000564260 DIAPH3Q9NSV4 1193 aa20■□□□□ 0.79
RNF40-206ENST00000564260 MCM9Q9NXL9 1143 aa20■□□□□ 0.79
RNF40-206ENST00000564260 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
RNF40-206ENST00000564260 DDX60LQ5H9U9 1706 aaKnown RBP19.99■□□□□ 0.79
RNF40-206ENST00000564260 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 POLR3DP05423 398 aaPredicted RBP19.99■□□□□ 0.79
RNF40-206ENST00000564260 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.99■□□□□ 0.79
RNF40-206ENST00000564260 CRACR2BQ8N4Y2 399 aaPredicted RBP19.99■□□□□ 0.79
RNF40-206ENST00000564260 SDR42E1Q8WUS8 393 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms