RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ELP3Q9H9T3 547 aa24.2■■□□□ 1.46
CMTM3-207ENST00000564060 COL2A1P02458 1487 aaPredicted RBP24.19■■□□□ 1.46
CMTM3-207ENST00000564060 IDH1O75874 414 aaKnown RBP24.19■■□□□ 1.46
CMTM3-207ENST00000564060 ALDH1A1P00352 501 aa24.19■■□□□ 1.46
CMTM3-207ENST00000564060 MAP3K12Q12852 859 aa24.19■■□□□ 1.46
CMTM3-207ENST00000564060 PICALMQ13492 652 aa24.19■■□□□ 1.46
CMTM3-207ENST00000564060 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
CMTM3-207ENST00000564060 MYH7P12883 1935 aa24.19■■□□□ 1.46
CMTM3-207ENST00000564060 MIGA2Q7L4E1 593 aa24.18■■□□□ 1.46
CMTM3-207ENST00000564060 PIH1D3Q9NQM4 214 aaKnown RBP24.18■■□□□ 1.46
CMTM3-207ENST00000564060 ATRNL1Q5VV63 1379 aa24.17■■□□□ 1.46
CMTM3-207ENST00000564060 PPP4CP60510 307 aa24.17■■□□□ 1.46
CMTM3-207ENST00000564060 TEX11Q8IYF3 940 aa24.17■■□□□ 1.46
CMTM3-207ENST00000564060 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
CMTM3-207ENST00000564060 DCTPP1Q9H773 170 aa24.17■■□□□ 1.46
CMTM3-207ENST00000564060 AATFQ9NY61 560 aaKnown RBP eCLIP24.17■■□□□ 1.46
CMTM3-207ENST00000564060 DOCK1Q14185 1865 aa24.16■■□□□ 1.46
CMTM3-207ENST00000564060 SPDYE5A6NIY4 337 aa24.16■■□□□ 1.46
CMTM3-207ENST00000564060 OTUD7BQ6GQQ9 843 aa24.16■■□□□ 1.46
CMTM3-207ENST00000564060 ERO1BQ86YB8 467 aa24.16■■□□□ 1.46
CMTM3-207ENST00000564060 DDX4Q9NQI0 724 aaKnown RBP24.16■■□□□ 1.46
CMTM3-207ENST00000564060 CYP7A1P22680 504 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 AAMPQ13685 434 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 ZFPM1Q8IX07 1006 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 CRBNQ96SW2 442 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 ZNF112Q9UJU3 913 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 SNCAIPQ9Y6H5 919 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 MYH1P12882 1939 aa24.15■■□□□ 1.46
CMTM3-207ENST00000564060 GTF2A2P52657 109 aa24.14■■□□□ 1.45
CMTM3-207ENST00000564060 IFFO2Q5TF58 517 aa24.14■■□□□ 1.45
CMTM3-207ENST00000564060 MAGEB6Q8N7X4 407 aa24.14■■□□□ 1.45
CMTM3-207ENST00000564060 ZKSCAN4Q969J2 545 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-207ENST00000564060 OTUD5Q96G74 571 aa24.14■■□□□ 1.45
CMTM3-207ENST00000564060 OSBPL5Q9H0X9 879 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-207ENST00000564060 ATAD5Q96QE3 1844 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 ATP5JP18859 108 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 GJA5P36382 358 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 IFNL1Q8IU54 200 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 SH3RF3Q8TEJ3 882 aaPredicted RBP24.13■■□□□ 1.45
CMTM3-207ENST00000564060 GPATCH3Q96I76 525 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 DNAJC2Q99543 621 aaKnown RBP24.13■■□□□ 1.45
CMTM3-207ENST00000564060 CFHR5Q9BXR6 569 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 ANTXR1Q9H6X2 564 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 NDUFB9Q9Y6M9 179 aa24.13■■□□□ 1.45
CMTM3-207ENST00000564060 TESPA1A2RU30 521 aaPredicted RBP24.12■■□□□ 1.45
CMTM3-207ENST00000564060 DDTLA6NHG4 134 aaPredicted RBP24.12■■□□□ 1.45
CMTM3-207ENST00000564060 INPP5BP32019 993 aa24.12■■□□□ 1.45
CMTM3-207ENST00000564060 MAP3K10Q02779 954 aa24.12■■□□□ 1.45
CMTM3-207ENST00000564060 NOM1Q5C9Z4 860 aaKnown RBP24.12■■□□□ 1.45
CMTM3-207ENST00000564060 NOL9Q5SY16 702 aaKnown RBP24.12■■□□□ 1.45
CMTM3-207ENST00000564060 SH3BP5LQ7L8J4 393 aa24.12■■□□□ 1.45
CMTM3-207ENST00000564060 ADGRA1Q86SQ6 560 aa24.12■■□□□ 1.45
CMTM3-207ENST00000564060 DHX36Q9H2U1 1008 aaKnown RBP24.12■■□□□ 1.45
CMTM3-207ENST00000564060 PCDHB15Q9Y5E8 787 aa24.12■■□□□ 1.45
CMTM3-207ENST00000564060 TBC1D12O60347 775 aa24.11■■□□□ 1.45
CMTM3-207ENST00000564060 PPATQ06203 517 aa24.11■■□□□ 1.45
CMTM3-207ENST00000564060 PPIL2Q13356 520 aa24.11■■□□□ 1.45
CMTM3-207ENST00000564060 GOLIM4O00461 696 aa24.1■■□□□ 1.45
CMTM3-207ENST00000564060 SMARCA5O60264 1052 aaPredicted RBP24.1■■□□□ 1.45
CMTM3-207ENST00000564060 CNKSR2Q8WXI2 1034 aa24.1■■□□□ 1.45
CMTM3-207ENST00000564060 PAG1Q9NWQ8 432 aa24.1■■□□□ 1.45
CMTM3-207ENST00000564060 SNAPC2Q13487 334 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 TGFBRAP1Q8WUH2 860 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 MS4A4AQ96JQ5 239 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 HAUS7Q99871 368 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 BOLA2Q9H3K6 86 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 SIPA1L1O43166 1804 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 NAV1Q8NEY1 1877 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 FLT1P17948 1338 aa24.09■■□□□ 1.45
CMTM3-207ENST00000564060 CCL15-CCL14A0A0B4J2E2 113 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 TBC1D8O95759 1140 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 CETPP11597 493 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 CCL15Q16663 113 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 SLC9C2Q5TAH2 1124 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.08■■□□□ 1.45
CMTM3-207ENST00000564060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.08■■□□□ 1.45
CMTM3-207ENST00000564060 PICK1Q9NRD5 415 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 ECHDC1Q9NTX5 307 aa24.08■■□□□ 1.45
CMTM3-207ENST00000564060 ZBTB47Q9UFB7 747 aaPredicted RBP24.08■■□□□ 1.45
CMTM3-207ENST00000564060 HERC5Q9UII4 1024 aaKnown RBP24.08■■□□□ 1.45
CMTM3-207ENST00000564060 PHF20L1A8MW92 1017 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 IGF2BP3O00425 579 aaKnown RBP eCLIP24.07■■□□□ 1.44
CMTM3-207ENST00000564060 CTNND1O60716 968 aaKnown RBP24.07■■□□□ 1.44
CMTM3-207ENST00000564060 SCYL3Q8IZE3 742 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 MIGA1Q8NAN2 632 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 PI4KBQ9UBF8 816 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 PTPRFP10586 1907 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 PHIPQ8WWQ0 1821 aa24.07■■□□□ 1.44
CMTM3-207ENST00000564060 IRF6O14896 467 aa24.06■■□□□ 1.44
CMTM3-207ENST00000564060 PDE6AP16499 860 aa24.06■■□□□ 1.44
CMTM3-207ENST00000564060 MAPKAPK5Q8IW41 473 aa24.06■■□□□ 1.44
CMTM3-207ENST00000564060 ZCCHC17Q9NP64 241 aaKnown RBP24.06■■□□□ 1.44
CMTM3-207ENST00000564060 GPR25O00155 361 aa24.05■■□□□ 1.44
CMTM3-207ENST00000564060 HLA-DOAP06340 250 aa24.05■■□□□ 1.44
CMTM3-207ENST00000564060 USP5P45974 858 aa24.05■■□□□ 1.44
CMTM3-207ENST00000564060 DYNLL1P63167 89 aaKnown RBP24.05■■□□□ 1.44
CMTM3-207ENST00000564060 BRI3BPQ8WY22 251 aa24.05■■□□□ 1.44
CMTM3-207ENST00000564060 TRIM34Q9BYJ4 488 aa24.05■■□□□ 1.44
CMTM3-207ENST00000564060 MAGEB6P1A0A0J9YX57 407 aa24.04■■□□□ 1.44
CMTM3-207ENST00000564060 HDAC1Q13547 482 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms