RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 IDH1O75874 414 aaKnown RBP37.51■■■■□ 3.6
CMTM4-204ENST00000563952 TBC1D8O95759 1140 aa37.51■■■■□ 3.6
CMTM4-204ENST00000563952 OTUD5Q96G74 571 aa37.51■■■■□ 3.6
CMTM4-204ENST00000563952 SNCAIPQ9Y6H5 919 aa37.51■■■■□ 3.6
CMTM4-204ENST00000563952 INHBEP58166 350 aa37.5■■■■□ 3.59
CMTM4-204ENST00000563952 SH3BP5LQ7L8J4 393 aa37.5■■■■□ 3.59
CMTM4-204ENST00000563952 AATFQ9NY61 560 aaKnown RBP eCLIP37.5■■■■□ 3.59
CMTM4-204ENST00000563952 MAP4K4O95819 1239 aaPredicted RBP37.49■■■■□ 3.59
CMTM4-204ENST00000563952 ADGRA1Q86SQ6 560 aa37.49■■■■□ 3.59
CMTM4-204ENST00000563952 TEX11Q8IYF3 940 aa37.49■■■■□ 3.59
CMTM4-204ENST00000563952 ANTXR1Q9H6X2 564 aa37.49■■■■□ 3.59
CMTM4-204ENST00000563952 DDTLA6NHG4 134 aaPredicted RBP37.48■■■■□ 3.59
CMTM4-204ENST00000563952 BAG3O95817 575 aa37.48■■■■□ 3.59
CMTM4-204ENST00000563952 INPP5BP32019 993 aa37.48■■■■□ 3.59
CMTM4-204ENST00000563952 IFNL1Q8IU54 200 aa37.48■■■■□ 3.59
CMTM4-204ENST00000563952 SH3RF3Q8TEJ3 882 aaPredicted RBP37.48■■■■□ 3.59
CMTM4-204ENST00000563952 LRRCC1Q9C099 1032 aa37.48■■■■□ 3.59
CMTM4-204ENST00000563952 SPDYE5A6NIY4 337 aa37.46■■■■□ 3.59
CMTM4-204ENST00000563952 IGSF3O75054 1194 aa37.46■■■■□ 3.59
CMTM4-204ENST00000563952 ZNF112Q9UJU3 913 aa37.46■■■■□ 3.59
CMTM4-204ENST00000563952 ATRNL1Q5VV63 1379 aa37.45■■■■□ 3.59
CMTM4-204ENST00000563952 IGF2BP3O00425 579 aaKnown RBP eCLIP37.45■■■■□ 3.59
CMTM4-204ENST00000563952 SMARCA5O60264 1052 aaPredicted RBP37.45■■■■□ 3.59
CMTM4-204ENST00000563952 CYP7A1P22680 504 aa37.45■■■■□ 3.59
CMTM4-204ENST00000563952 ERO1BQ86YB8 467 aa37.45■■■■□ 3.59
CMTM4-204ENST00000563952 NPM3O75607 178 aaKnown RBP37.44■■■■□ 3.58
CMTM4-204ENST00000563952 CAPN15O75808 1086 aa37.44■■■■□ 3.58
CMTM4-204ENST00000563952 ALDH1A1P00352 501 aa37.44■■■■□ 3.58
CMTM4-204ENST00000563952 PLCG2P16885 1265 aa37.44■■■■□ 3.58
CMTM4-204ENST00000563952 MAGEB6Q8N7X4 407 aa37.44■■■■□ 3.58
CMTM4-204ENST00000563952 CRBNQ96SW2 442 aa37.44■■■■□ 3.58
CMTM4-204ENST00000563952 DNAJC2Q99543 621 aaKnown RBP37.44■■■■□ 3.58
CMTM4-204ENST00000563952 MAP3K12Q12852 859 aa37.43■■■■□ 3.58
CMTM4-204ENST00000563952 PCDHB15Q9Y5E8 787 aa37.43■■■■□ 3.58
CMTM4-204ENST00000563952 GTF2A2P52657 109 aa37.42■■■■□ 3.58
CMTM4-204ENST00000563952 PPP4CP60510 307 aa37.42■■■■□ 3.58
CMTM4-204ENST00000563952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP37.42■■■■□ 3.58
CMTM4-204ENST00000563952 MS4A4AQ96JQ5 239 aa37.42■■■■□ 3.58
CMTM4-204ENST00000563952 OSBPL5Q9H0X9 879 aaPredicted RBP37.42■■■■□ 3.58
CMTM4-204ENST00000563952 DCTPP1Q9H773 170 aa37.42■■■■□ 3.58
CMTM4-204ENST00000563952 SLURP2P0DP57 97 aa37.41■■■■□ 3.58
CMTM4-204ENST00000563952 TTF1Q15361 905 aaPredicted RBP37.41■■■■□ 3.58
CMTM4-204ENST00000563952 OTUD7BQ6GQQ9 843 aa37.41■■■■□ 3.58
CMTM4-204ENST00000563952 TESPA1A2RU30 521 aaPredicted RBP37.4■■■■□ 3.58
CMTM4-204ENST00000563952 PTPN18Q99952 460 aa37.4■■■■□ 3.58
CMTM4-204ENST00000563952 R3HDMLQ9H3Y0 253 aa37.4■■■■□ 3.58
CMTM4-204ENST00000563952 CCL15-CCL14A0A0B4J2E2 113 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 GOLIM4O00461 696 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 DYNLL1P63167 89 aaKnown RBP37.39■■■■□ 3.58
CMTM4-204ENST00000563952 CCL15Q16663 113 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 MIGA1Q8NAN2 632 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 TGFBRAP1Q8WUH2 860 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 CDK5RAP2Q96SN8 1893 aa37.39■■■■□ 3.58
CMTM4-204ENST00000563952 PHF20L1A8MW92 1017 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 IRF6O14896 467 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 PPIL2Q13356 520 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 NOL9Q5SY16 702 aaKnown RBP37.38■■■■□ 3.57
CMTM4-204ENST00000563952 BRI3BPQ8WY22 251 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 CFHR5Q9BXR6 569 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 BOLA2Q9H3K6 86 aa37.38■■■■□ 3.57
CMTM4-204ENST00000563952 PPATQ06203 517 aa37.37■■■■□ 3.57
CMTM4-204ENST00000563952 DGKZQ13574 1117 aa37.37■■■■□ 3.57
CMTM4-204ENST00000563952 MAPKAPK5Q8IW41 473 aa37.37■■■■□ 3.57
CMTM4-204ENST00000563952 COL2A1P02458 1487 aaPredicted RBP37.37■■■■□ 3.57
CMTM4-204ENST00000563952 GPR25O00155 361 aa37.36■■■■□ 3.57
CMTM4-204ENST00000563952 ATP5JP18859 108 aa37.36■■■■□ 3.57
CMTM4-204ENST00000563952 MAP3K10Q02779 954 aa37.36■■■■□ 3.57
CMTM4-204ENST00000563952 ZNF296Q8WUU4 475 aaPredicted RBP37.36■■■■□ 3.57
CMTM4-204ENST00000563952 FAM196BA6NMK8 535 aa37.35■■■■□ 3.57
CMTM4-204ENST00000563952 SNAPC2Q13487 334 aa37.35■■■■□ 3.57
CMTM4-204ENST00000563952 EDC3Q96F86 508 aaKnown RBP37.35■■■■□ 3.57
CMTM4-204ENST00000563952 MCOLN1Q9GZU1 580 aa37.35■■■■□ 3.57
CMTM4-204ENST00000563952 FOCADQ5VW36 1801 aa37.35■■■■□ 3.57
CMTM4-204ENST00000563952 CETPP11597 493 aa37.34■■■■□ 3.57
CMTM4-204ENST00000563952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP37.34■■■■□ 3.57
CMTM4-204ENST00000563952 FLT1P17948 1338 aa37.34■■■■□ 3.57
CMTM4-204ENST00000563952 SCYL3Q8IZE3 742 aa37.33■■■■□ 3.57
CMTM4-204ENST00000563952 PICK1Q9NRD5 415 aa37.33■■■■□ 3.57
CMTM4-204ENST00000563952 PAG1Q9NWQ8 432 aa37.33■■■■□ 3.57
CMTM4-204ENST00000563952 TBC1D12O60347 775 aa37.32■■■■□ 3.56
CMTM4-204ENST00000563952 SLC9C2Q5TAH2 1124 aa37.32■■■■□ 3.56
CMTM4-204ENST00000563952 TMED8Q6PL24 325 aaPredicted RBP37.32■■■■□ 3.56
CMTM4-204ENST00000563952 ABHD8Q96I13 439 aa37.32■■■■□ 3.56
CMTM4-204ENST00000563952 PDE6AP16499 860 aa37.31■■■■□ 3.56
CMTM4-204ENST00000563952 CRHR2Q13324 411 aa37.31■■■■□ 3.56
CMTM4-204ENST00000563952 NOM1Q5C9Z4 860 aaKnown RBP37.31■■■■□ 3.56
CMTM4-204ENST00000563952 HAUS7Q99871 368 aa37.31■■■■□ 3.56
CMTM4-204ENST00000563952 DOCK1Q14185 1865 aa37.3■■■■□ 3.56
CMTM4-204ENST00000563952 CERS3Q8IU89 383 aa37.3■■■■□ 3.56
CMTM4-204ENST00000563952 FAM43AQ8N2R8 423 aa37.3■■■■□ 3.56
CMTM4-204ENST00000563952 DHX36Q9H2U1 1008 aaKnown RBP37.3■■■■□ 3.56
CMTM4-204ENST00000563952 SAP30BPQ9UHR5 308 aaKnown RBP37.3■■■■□ 3.56
CMTM4-204ENST00000563952 CTNND1O60716 968 aaKnown RBP37.29■■■■□ 3.56
CMTM4-204ENST00000563952 FKTNO75072 461 aa37.29■■■■□ 3.56
CMTM4-204ENST00000563952 USP5P45974 858 aa37.28■■■■□ 3.56
CMTM4-204ENST00000563952 ECHDC1Q9NTX5 307 aa37.28■■■■□ 3.56
CMTM4-204ENST00000563952 PI4KBQ9UBF8 816 aa37.28■■■■□ 3.56
CMTM4-204ENST00000563952 PALD1Q9ULE6 856 aa37.28■■■■□ 3.56
CMTM4-204ENST00000563952 PTPRAP18433 802 aa37.27■■■■□ 3.56
CMTM4-204ENST00000563952 TAF1CQ15572 869 aaPredicted RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms