RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 PHF20L1A8MW92 1017 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 IRF5Q13568 498 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 FASTKD5Q7L8L6 764 aaKnown RBP18.5■□□□□ 0.55
SCAPER-209ENST00000563919 PRRT2Q7Z6L0 340 aaPredicted RBP18.5■□□□□ 0.55
SCAPER-209ENST00000563919 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 PRUNE2Q8WUY3 3088 aa18.5■□□□□ 0.55
SCAPER-209ENST00000563919 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
SCAPER-209ENST00000563919 ZFPM1Q8IX07 1006 aa18.49■□□□□ 0.55
SCAPER-209ENST00000563919 CRISPLD2Q9H0B8 497 aa18.49■□□□□ 0.55
SCAPER-209ENST00000563919 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
SCAPER-209ENST00000563919 SLC45A1Q9Y2W3 748 aa18.49■□□□□ 0.55
SCAPER-209ENST00000563919 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
SCAPER-209ENST00000563919 ATRNL1Q5VV63 1379 aa18.48■□□□□ 0.55
SCAPER-209ENST00000563919 PTPRAP18433 802 aa18.48■□□□□ 0.55
SCAPER-209ENST00000563919 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
SCAPER-209ENST00000563919 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
SCAPER-209ENST00000563919 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
SCAPER-209ENST00000563919 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
SCAPER-209ENST00000563919 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
SCAPER-209ENST00000563919 TNPO2O14787 897 aaKnown RBP18.46■□□□□ 0.55
SCAPER-209ENST00000563919 PRDX5P30044 214 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 BMP8BP34820 402 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
SCAPER-209ENST00000563919 GPR153Q6NV75 609 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 GADL1Q6ZQY3 521 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 LPIN2Q92539 896 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 GDF15Q99988 308 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 ALPK3Q96L96 1907 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 MYH13Q9UKX3 1938 aa18.46■□□□□ 0.55
SCAPER-209ENST00000563919 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
SCAPER-209ENST00000563919 SLC5A1P13866 664 aa18.45■□□□□ 0.54
SCAPER-209ENST00000563919 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
SCAPER-209ENST00000563919 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
SCAPER-209ENST00000563919 MIER1Q8N108 512 aa18.45■□□□□ 0.54
SCAPER-209ENST00000563919 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
SCAPER-209ENST00000563919 DIS3LQ8TF46 1054 aaKnown RBP18.44■□□□□ 0.54
SCAPER-209ENST00000563919 IDI2Q9BXS1 227 aa18.44■□□□□ 0.54
SCAPER-209ENST00000563919 PTPRFP10586 1907 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 EYA2O00167 538 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 RFX5P48382 616 aaPredicted RBP18.43■□□□□ 0.54
SCAPER-209ENST00000563919 RGS3P49796 1198 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 COA7Q96BR5 231 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
SCAPER-209ENST00000563919 ENTPD3O75355 529 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 DEFB123Q8N688 67 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 ANKRD13CQ8N6S4 541 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 ANKLE1Q8NAG6 615 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.54
SCAPER-209ENST00000563919 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
SCAPER-209ENST00000563919 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 PHIPQ8WWQ0 1821 aa18.42■□□□□ 0.54
SCAPER-209ENST00000563919 TRIM75PA6NK02 468 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
SCAPER-209ENST00000563919 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 C7orf61Q8IZ16 206 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
SCAPER-209ENST00000563919 AGTPBP1Q9UPW5 1226 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 DOCK2Q92608 1830 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
SCAPER-209ENST00000563919 DDTLA6NHG4 134 aaPredicted RBP18.4■□□□□ 0.54
SCAPER-209ENST00000563919 FAM110CQ1W6H9 321 aa18.4■□□□□ 0.54
SCAPER-209ENST00000563919 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
SCAPER-209ENST00000563919 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
SCAPER-209ENST00000563919 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 LRIT3Q3SXY7 679 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 TREML2Q5T2D2 321 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 Q7L0L9 218 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.53
SCAPER-209ENST00000563919 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.39■□□□□ 0.53
SCAPER-209ENST00000563919 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 STXBP5LQ9Y2K9 1186 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 GAKO14976 1311 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
SCAPER-209ENST00000563919 DOCK1Q14185 1865 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 SEMA3EO15041 775 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 HMGCRP04035 888 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 ATP2B3Q16720 1220 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 DDX4Q9NQI0 724 aaKnown RBP18.38■□□□□ 0.53
SCAPER-209ENST00000563919 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 MUC3AQ02505 3323 aa18.38■□□□□ 0.53
SCAPER-209ENST00000563919 ZBTB22O15209 634 aa18.37■□□□□ 0.53
SCAPER-209ENST00000563919 PHKA1P46020 1223 aa18.37■□□□□ 0.53
SCAPER-209ENST00000563919 CCDC84Q86UT8 332 aaPredicted RBP18.37■□□□□ 0.53
SCAPER-209ENST00000563919 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
SCAPER-209ENST00000563919 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
SCAPER-209ENST00000563919 PTPRCP08575 1304 aa18.37■□□□□ 0.53
SCAPER-209ENST00000563919 RPTORQ8N122 1335 aa18.37■□□□□ 0.53
SCAPER-209ENST00000563919 SYN1P17600 705 aa18.36■□□□□ 0.53
SCAPER-209ENST00000563919 MAGEA10P43363 369 aaPredicted RBP18.36■□□□□ 0.53
SCAPER-209ENST00000563919 TRIM32Q13049 653 aa18.36■□□□□ 0.53
SCAPER-209ENST00000563919 TDHQ8IZJ6 230 aa18.36■□□□□ 0.53
SCAPER-209ENST00000563919 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
SCAPER-209ENST00000563919 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms