RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 PCP11498 1178 aaKnown RBP27.94■■■□□ 2.06
ZNF688-204ENST00000563665 CIAPIN1Q6FI81 312 aa27.94■■■□□ 2.06
ZNF688-204ENST00000563665 APOBEC3HQ6NTF7 200 aaKnown RBP27.94■■■□□ 2.06
ZNF688-204ENST00000563665 TGFBRAP1Q8WUH2 860 aa27.94■■■□□ 2.06
ZNF688-204ENST00000563665 USP17L12C9JPN9 530 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 USP17L21D6R901 530 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 CTDSPL2Q05D32 466 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 TNIP1Q15025 636 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 FBXL16Q8N461 479 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 LIMCH1Q9UPQ0 1083 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 ROBO3Q96MS0 1386 aa27.93■■■□□ 2.06
ZNF688-204ENST00000563665 MMP14P50281 582 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 PRELPP51888 382 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 MFSD6Q6ZSS7 791 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 TMX3Q96JJ7 454 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 AGXT2Q9BYV1 514 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 MCM9Q9NXL9 1143 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 FLT1P17948 1338 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 MINDY4BA8MYZ0 360 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 MCM5P33992 734 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 KRT23Q9C075 422 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 HDAC9Q9UKV0 1011 aa27.92■■■□□ 2.06
ZNF688-204ENST00000563665 NEDD4P46934 1319 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 FZD9O00144 591 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 FGRP09769 529 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 TOB2Q14106 344 aaPredicted RBP27.91■■■□□ 2.06
ZNF688-204ENST00000563665 CDC42EP5Q6NZY7 148 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 AMOTL1Q8IY63 956 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 ZSCAN31Q96LW9 406 aaPredicted RBP27.91■■■□□ 2.06
ZNF688-204ENST00000563665 USP40Q9NVE5 1235 aa27.91■■■□□ 2.06
ZNF688-204ENST00000563665 SLC3A2P08195 630 aaKnown RBP27.9■■■□□ 2.06
ZNF688-204ENST00000563665 C12orf60Q5U649 245 aa27.9■■■□□ 2.06
ZNF688-204ENST00000563665 ARHGAP27Q6ZUM4 889 aa27.9■■■□□ 2.06
ZNF688-204ENST00000563665 MAPKAPK5Q8IW41 473 aa27.9■■■□□ 2.06
ZNF688-204ENST00000563665 TCEANC2Q96MN5 208 aa27.9■■■□□ 2.06
ZNF688-204ENST00000563665 TACC3Q9Y6A5 838 aa27.9■■■□□ 2.06
ZNF688-204ENST00000563665 WDHD1O75717 1129 aaPredicted RBP27.89■■■□□ 2.06
ZNF688-204ENST00000563665 RPS12P25398 132 aaKnown RBP27.89■■■□□ 2.06
ZNF688-204ENST00000563665 NT5C2P49902 561 aa27.89■■■□□ 2.06
ZNF688-204ENST00000563665 CUL4AQ13619 759 aa27.89■■■□□ 2.06
ZNF688-204ENST00000563665 SH2B1Q9NRF2 756 aaPredicted RBP27.89■■■□□ 2.06
ZNF688-204ENST00000563665 CYP2D7A0A087X1C5 515 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 USP17L8P0C7I0 530 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 LMNB1P20700 586 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 RBM5P52756 815 aaKnown RBP eCLIP27.88■■■□□ 2.05
ZNF688-204ENST00000563665 EIF6P56537 245 aaKnown RBP27.88■■■□□ 2.05
ZNF688-204ENST00000563665 CFAP100Q494V2 611 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 Q6ZUG5 572 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 OGFOD1Q8N543 542 aa27.88■■■□□ 2.05
ZNF688-204ENST00000563665 PRC1O43663 620 aa27.87■■■□□ 2.05
ZNF688-204ENST00000563665 NPM3O75607 178 aaKnown RBP27.87■■■□□ 2.05
ZNF688-204ENST00000563665 ANTXR2P58335 489 aa27.87■■■□□ 2.05
ZNF688-204ENST00000563665 NOL8Q76FK4 1167 aaKnown RBP27.87■■■□□ 2.05
ZNF688-204ENST00000563665 MTMR14Q8NCE2 650 aa27.87■■■□□ 2.05
ZNF688-204ENST00000563665 MTA3Q9BTC8 594 aa27.87■■■□□ 2.05
ZNF688-204ENST00000563665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.87■■■□□ 2.05
ZNF688-204ENST00000563665 B4E1Z4 1266 aa27.86■■■□□ 2.05
ZNF688-204ENST00000563665 ORC4O43929 436 aa27.86■■■□□ 2.05
ZNF688-204ENST00000563665 ZBTB12Q9Y330 459 aaPredicted RBP27.86■■■□□ 2.05
ZNF688-204ENST00000563665 HSP90AA1P07900 732 aaKnown RBP27.85■■■□□ 2.05
ZNF688-204ENST00000563665 CYP2D6P10635 497 aa27.85■■■□□ 2.05
ZNF688-204ENST00000563665 IDI2Q9BXS1 227 aa27.85■■■□□ 2.05
ZNF688-204ENST00000563665 POLR3DP05423 398 aaPredicted RBP27.84■■■□□ 2.05
ZNF688-204ENST00000563665 YBX3P16989 372 aaKnown RBP eCLIP27.84■■■□□ 2.05
ZNF688-204ENST00000563665 FGD1P98174 961 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 CYB5R4Q7L1T6 521 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 ESR2Q92731 530 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 INTS4Q96HW7 963 aaKnown RBP27.84■■■□□ 2.05
ZNF688-204ENST00000563665 TMEM87BQ96K49 555 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 SPDYE2BA6NHP3 402 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 SMIM22K7EJ46 135 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 KDM4AO75164 1064 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 SPDYE6P0CI01 402 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 MYH8P13535 1937 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 PDE4BQ07343 736 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 LRRC2Q9BYS8 371 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 DDX4Q9NQI0 724 aaKnown RBP27.84■■■□□ 2.05
ZNF688-204ENST00000563665 INCENPQ9NQS7 918 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 TPCN1Q9ULQ1 816 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 PCDHAC2Q9Y5I4 1007 aa27.84■■■□□ 2.05
ZNF688-204ENST00000563665 COL2A1P02458 1487 aaPredicted RBP27.83■■■□□ 2.05
ZNF688-204ENST00000563665 EVCP57679 992 aa27.83■■■□□ 2.05
ZNF688-204ENST00000563665 DPF2Q92785 391 aa27.83■■■□□ 2.05
ZNF688-204ENST00000563665 BRF1Q92994 677 aa27.83■■■□□ 2.05
ZNF688-204ENST00000563665 OSBPL5Q9H0X9 879 aaPredicted RBP27.83■■■□□ 2.05
ZNF688-204ENST00000563665 SAP30BPQ9UHR5 308 aaKnown RBP27.83■■■□□ 2.05
ZNF688-204ENST00000563665 ZNF280AP59817 542 aaPredicted RBP27.82■■■□□ 2.04
ZNF688-204ENST00000563665 DLGAP5Q15398 846 aa27.82■■■□□ 2.04
ZNF688-204ENST00000563665 CHST3Q7LGC8 479 aa27.82■■■□□ 2.04
ZNF688-204ENST00000563665 NKX2-3Q8TAU0 364 aa27.82■■■□□ 2.04
ZNF688-204ENST00000563665 PRMT6Q96LA8 375 aaPredicted RBP27.82■■■□□ 2.04
ZNF688-204ENST00000563665 TOMM22Q9NS69 142 aa27.82■■■□□ 2.04
ZNF688-204ENST00000563665 ZSWIM5Q9P217 1185 aa27.82■■■□□ 2.04
ZNF688-204ENST00000563665 SOCS7O14512 581 aa27.81■■■□□ 2.04
ZNF688-204ENST00000563665 LARGE1O95461 756 aa27.81■■■□□ 2.04
ZNF688-204ENST00000563665 EVX2Q03828 476 aa27.81■■■□□ 2.04
ZNF688-204ENST00000563665 PICALMQ13492 652 aa27.81■■■□□ 2.04
ZNF688-204ENST00000563665 ME3Q16798 604 aa27.81■■■□□ 2.04
ZNF688-204ENST00000563665 RRP12Q5JTH9 1297 aaKnown RBP27.81■■■□□ 2.04
ZNF688-204ENST00000563665 SPRYD3Q8NCJ5 442 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms