RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.24
ABCA3-203ENST00000563623 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.24
ABCA3-203ENST00000563623 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.24
ABCA3-203ENST00000563623 ERICH2A1L162 156 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 COBLO75128 1261 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 TPM1P09493 284 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 TDO2P48775 406 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
ABCA3-203ENST00000563623 DHX58Q96C10 678 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
ABCA3-203ENST00000563623 TUBB4AP04350 444 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 LMAN1P49257 510 aa13.52□□□□□ -0.25
ABCA3-203ENST00000563623 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.25
ABCA3-203ENST00000563623 ZNF532Q9HCE3 1301 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 HNRNPH2P55795 449 aaKnown RBP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 POSTNQ15063 836 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 STAMQ92783 540 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 MED1Q15648 1581 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 EFCAB8A8MWE9 144 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 TADA3O75528 432 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 LRP10Q7Z4F1 713 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 REXO1L1PQ8IX06 675 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 DACH1Q9UI36 760 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 NFAT5O94916 1531 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 GRIN1Q05586 938 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 MTF1Q14872 753 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 SPECC1LQ69YQ0 1117 aa13.51□□□□□ -0.25
ABCA3-203ENST00000563623 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
ABCA3-203ENST00000563623 SMC1AQ14683 1233 aaKnown RBP13.5□□□□□ -0.25
ABCA3-203ENST00000563623 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 TRIM65Q6PJ69 517 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 MINDY4BA8MYZ0 360 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 MCAMP43121 646 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 VWA3AA6NCI4 1184 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
ABCA3-203ENST00000563623 RHOXF2BP0C7M4 288 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 CASP1P29466 404 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 NR5A1Q13285 461 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 RESP18Q5W5W9 173 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
ABCA3-203ENST00000563623 GOLGA1Q92805 767 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 RHOXF2Q9BQY4 288 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 TUBE1Q9UJT0 475 aa13.5□□□□□ -0.25
ABCA3-203ENST00000563623 KIF5CO60282 957 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 PPP6R2O75170 966 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 FMR1Q06787 632 aaKnown RBP eCLIP13.49□□□□□ -0.25
ABCA3-203ENST00000563623 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
ABCA3-203ENST00000563623 SOWAHDA6NJG2 315 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 SNAP23O00161 211 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 MBD4O95243 580 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ITGA6P23229 1130 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ST5P78524 1137 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 RTN1Q16799 776 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 PIH1D3Q9NQM4 214 aaKnown RBP13.49□□□□□ -0.25
ABCA3-203ENST00000563623 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 FOXP2O15409 715 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 CIAO1O76071 339 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 CCDC175P0C221 793 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 NOSTRINQ8IVI9 506 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 CNPY4Q8N129 248 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
ABCA3-203ENST00000563623 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 PHACTR2O75167 634 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 PHKA1P46020 1223 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
ABCA3-203ENST00000563623 SMYD4Q8IYR2 804 aaPredicted RBP13.48□□□□□ -0.25
ABCA3-203ENST00000563623 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
ABCA3-203ENST00000563623 AKR1B15C9JRZ8 316 aaPredicted RBP13.48□□□□□ -0.25
ABCA3-203ENST00000563623 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
ABCA3-203ENST00000563623 WTAPQ15007 396 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 PTPAQ15257 358 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 IGSF22Q8N9C0 903 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms