RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RNF41Q9H4P4 317 aaPredicted RBP11.02□□□□□ -0.64
LINC00838-201ENST00000562956 DCP1AQ9NPI6 582 aaPredicted RBP11.02□□□□□ -0.64
LINC00838-201ENST00000562956 ANKRD31Q8N7Z5 1873 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 USP17L21D6R901 530 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 ADD1P35611 737 aaKnown RBP11.02□□□□□ -0.65
LINC00838-201ENST00000562956 PDE6BP35913 854 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 LIFRP42702 1097 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 METAP2P50579 478 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00838-201ENST00000562956 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 CPLX1O14810 134 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 CDC27P30260 824 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
LINC00838-201ENST00000562956 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
LINC00838-201ENST00000562956 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 KIF3AQ9Y496 699 aa11.02□□□□□ -0.65
LINC00838-201ENST00000562956 MYH13Q9UKX3 1938 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 KRT85P78386 507 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 SLC15A2Q16348 729 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
LINC00838-201ENST00000562956 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 ZBTB43O43298 467 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 PRDM1O75626 825 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 ZNF445P59923 1031 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 UBE2HP62256 183 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 ATP8A2Q9NTI2 1148 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
LINC00838-201ENST00000562956 ORC3Q9UBD5 711 aaPredicted RBP11.01□□□□□ -0.65
LINC00838-201ENST00000562956 SLC12A7Q9Y666 1083 aa11.01□□□□□ -0.65
LINC00838-201ENST00000562956 CCDC69A6NI79 296 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 CYP2D6P10635 497 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 ALDH1B1P30837 517 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 TTC6Q86TZ1 520 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
LINC00838-201ENST00000562956 ESR2Q92731 530 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 MASTLQ96GX5 879 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 ZSCAN16Q9H4T2 348 aaPredicted RBP11□□□□□ -0.65
LINC00838-201ENST00000562956 MAST2Q6P0Q8 1798 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 LRRC37AA6NMS7 1700 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 LTBP1Q14766 1721 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 FGRP09769 529 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 GSTO1P78417 241 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 WTAPQ15007 396 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
LINC00838-201ENST00000562956 CSPP1Q1MSJ5 1256 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 GRPEL1Q9HAV7 217 aa11□□□□□ -0.65
LINC00838-201ENST00000562956 GOLGA8AA7E2F4 631 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 SLC4A8Q2Y0W8 1093 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MFSD14BQ5SR56 506 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MPNDQ8N594 471 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 ZNF622Q969S3 477 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00838-201ENST00000562956 GJB4Q9NTQ9 266 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
LINC00838-201ENST00000562956 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
LINC00838-201ENST00000562956 RGPD3A6NKT7 1758 aaPredicted RBP10.99□□□□□ -0.65
LINC00838-201ENST00000562956 RGPD4Q7Z3J3 1758 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MROH7-TTC4A0A0A0MT08 1334 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 SYCE3A1L190 88 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 IGSF3O75054 1194 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 NTRK3Q16288 839 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 PHKBQ93100 1093 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 RTFDC1Q9BY42 306 aaPredicted RBP10.99□□□□□ -0.65
LINC00838-201ENST00000562956 MCM9Q9NXL9 1143 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 TNKSO95271 1327 aa10.99□□□□□ -0.65
LINC00838-201ENST00000562956 ERICH2A1L162 156 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 RANBP6O60518 1105 aaKnown RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 MRE11P49959 708 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 SEC23AQ15436 765 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 C2CD5Q86YS7 1000 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 C8orf76Q96K31 380 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 ARPP21Q9UBL0 812 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 TCHHQ07283 1943 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 DUOX1Q9NRD9 1551 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 BAG3O95817 575 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 USP5P45974 858 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 PPP4CP60510 307 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 GTF2IP78347 998 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 LEO1Q8WVC0 666 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 SPATA32Q96LK8 384 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 SCAND2PQ9GZW5 306 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 COL11A2P13942 1736 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 ELP1O95163 1332 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 CDKL5O76039 1030 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 SYNE3Q6ZMZ3 975 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms