RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 CCDC39Q9UFE4 941 aa8.19□□□□□ -1.1
CHD9-206ENST00000562791 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
CHD9-206ENST00000562791 GIPC1O14908 333 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 PRNPP04156 253 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 OGFOD3Q6PK18 319 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 SND1Q7KZF4 910 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD9-206ENST00000562791 ANKRD24Q8TF21 1146 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 ACSBG1Q96GR2 724 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 FAM8A1Q9UBU6 413 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 U3KQE9 123 aa8.18□□□□□ -1.1
CHD9-206ENST00000562791 FAM87AP0C7U9 286 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 NTF4P34130 210 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 ERVK-24P63145 666 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 HNRNPUQ00839 825 aaKnown RBP eCLIP8.17□□□□□ -1.1
CHD9-206ENST00000562791 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 CSADQ9Y600 493 aa8.17□□□□□ -1.1
CHD9-206ENST00000562791 ANKRD33BA6NCL7 494 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.16□□□□□ -1.1
CHD9-206ENST00000562791 LEFTY1O75610 366 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 IRAK1P51617 712 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 PPM1JQ5JR12 505 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 PCNX4Q63HM2 1172 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 VSIG10LQ86VR7 867 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
CHD9-206ENST00000562791 ANGEL1Q9UNK9 670 aaKnown RBP8.16□□□□□ -1.1
CHD9-206ENST00000562791 COL17A1Q9UMD9 1497 aaPredicted RBP8.15□□□□□ -1.1
CHD9-206ENST00000562791 DCDC2CA8MYV0 355 aa8.15□□□□□ -1.1
CHD9-206ENST00000562791 TRIM37O94972 964 aa8.15□□□□□ -1.1
CHD9-206ENST00000562791 GNA15P30679 374 aa8.15□□□□□ -1.1
CHD9-206ENST00000562791 LLGL2Q6P1M3 1020 aa8.15□□□□□ -1.1
CHD9-206ENST00000562791 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
CHD9-206ENST00000562791 BSDC1Q9NW68 430 aaPredicted RBP8.15□□□□□ -1.1
CHD9-206ENST00000562791 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
CHD9-206ENST00000562791 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
CHD9-206ENST00000562791 FAM181AQ8N9Y4 354 aa8.14□□□□□ -1.11
CHD9-206ENST00000562791 ADGRE2Q9UHX3 823 aa8.14□□□□□ -1.11
CHD9-206ENST00000562791 PCOLCE2Q9UKZ9 415 aa8.14□□□□□ -1.11
CHD9-206ENST00000562791 TTF2Q9UNY4 1162 aaKnown RBP8.14□□□□□ -1.11
CHD9-206ENST00000562791 PDIA4P13667 645 aaKnown RBP8.13□□□□□ -1.11
CHD9-206ENST00000562791 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
CHD9-206ENST00000562791 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
CHD9-206ENST00000562791 RING1Q06587 406 aa8.13□□□□□ -1.11
CHD9-206ENST00000562791 C12orf40Q86WS4 652 aa8.13□□□□□ -1.11
CHD9-206ENST00000562791 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
CHD9-206ENST00000562791 DUSP23Q9BVJ7 150 aa8.13□□□□□ -1.11
CHD9-206ENST00000562791 SAMM50Q9Y512 469 aa8.13□□□□□ -1.11
CHD9-206ENST00000562791 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 EIF4BP23588 611 aaKnown RBP8.12□□□□□ -1.11
CHD9-206ENST00000562791 COL19A1Q14993 1142 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 CYP27C1Q4G0S4 372 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 DNAJC14Q6Y2X3 702 aaPredicted RBP8.12□□□□□ -1.11
CHD9-206ENST00000562791 ZNF574Q6ZN55 896 aaPredicted RBP8.12□□□□□ -1.11
CHD9-206ENST00000562791 NPAS4Q8IUM7 802 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD9-206ENST00000562791 PLD6Q8N2A8 252 aaKnown RBP8.12□□□□□ -1.11
CHD9-206ENST00000562791 TOP6BLQ8N6T0 577 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 GAL3ST3Q96A11 431 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
CHD9-206ENST00000562791 INPP5AQ14642 412 aa8.11□□□□□ -1.11
CHD9-206ENST00000562791 LRRC14Q15048 493 aa8.11□□□□□ -1.11
CHD9-206ENST00000562791 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
CHD9-206ENST00000562791 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
CHD9-206ENST00000562791 FLCNQ8NFG4 579 aa8.11□□□□□ -1.11
CHD9-206ENST00000562791 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
CHD9-206ENST00000562791 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
CHD9-206ENST00000562791 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
CHD9-206ENST00000562791 CYP8B1Q9UNU6 501 aa8.11□□□□□ -1.11
CHD9-206ENST00000562791 ZBTB37Q5TC79 503 aa8.1□□□□□ -1.11
CHD9-206ENST00000562791 LRFN4Q6PJG9 635 aa8.1□□□□□ -1.11
CHD9-206ENST00000562791 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
CHD9-206ENST00000562791 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
CHD9-206ENST00000562791 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
CHD9-206ENST00000562791 CDK8P49336 464 aa8.09□□□□□ -1.11
CHD9-206ENST00000562791 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
CHD9-206ENST00000562791 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
CHD9-206ENST00000562791 TP53INP2Q8IXH6 220 aa8.09□□□□□ -1.11
CHD9-206ENST00000562791 FBXL18Q96ME1 805 aa8.09□□□□□ -1.11
CHD9-206ENST00000562791 BNIP3Q12983 259 aa8.08□□□□□ -1.12
CHD9-206ENST00000562791 SPRED2Q7Z698 418 aa8.08□□□□□ -1.12
CHD9-206ENST00000562791 PLPPR2Q96GM1 343 aa8.08□□□□□ -1.12
CHD9-206ENST00000562791 KRTAP4-12Q9BQ66 201 aa8.08□□□□□ -1.12
CHD9-206ENST00000562791 PICK1Q9NRD5 415 aa8.08□□□□□ -1.12
CHD9-206ENST00000562791 PRAMEF27A3QJZ7 478 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 FANCGO15287 622 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 OXCT1P55809 520 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
CHD9-206ENST00000562791 SCARA3Q6AZY7 606 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 CBLL1Q75N03 491 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 NETO1Q8TDF5 533 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 ELMO3Q96BJ8 720 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 HEXIM2Q96MH2 286 aaKnown RBP8.07□□□□□ -1.12
CHD9-206ENST00000562791 FBRSQ9HAH7 460 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 PARP2Q9UGN5 583 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 PCDHB5Q9Y5E4 795 aa8.07□□□□□ -1.12
CHD9-206ENST00000562791 CD96P40200 585 aa8.06□□□□□ -1.12
CHD9-206ENST00000562791 FAM214BQ7L5A3 538 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms