RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SLC5A1P13866 664 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
PCAT1-202ENST00000561978 KRT85P78386 507 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 STK3Q13188 491 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 BRF1Q92994 677 aa13.65□□□□□ -0.22
PCAT1-202ENST00000561978 ZNF541Q9H0D2 1346 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 GADD45BO75293 160 aaPredicted RBP13.64□□□□□ -0.23
PCAT1-202ENST00000561978 MCAMP43121 646 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
PCAT1-202ENST00000561978 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
PCAT1-202ENST00000561978 SCARF1Q14162 830 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 STOX1Q6ZVD7 989 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 ZNF274Q96GC6 653 aaPredicted RBP13.64□□□□□ -0.23
PCAT1-202ENST00000561978 PPP1R9BQ96SB3 815 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
PCAT1-202ENST00000561978 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 SCN9AQ15858 1988 aa13.64□□□□□ -0.23
PCAT1-202ENST00000561978 YDJCA8MPS7 323 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 G3V3G9 751 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 FZD9O00144 591 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 ECE2O60344 883 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 FGFR2P21802 821 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 CLCN6P51797 869 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
PCAT1-202ENST00000561978 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 RAD17O75943 681 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
PCAT1-202ENST00000561978 ADD2P35612 726 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
PCAT1-202ENST00000561978 ZSCAN16Q9H4T2 348 aaPredicted RBP13.63□□□□□ -0.23
PCAT1-202ENST00000561978 ZNRF3Q9ULT6 936 aa13.63□□□□□ -0.23
PCAT1-202ENST00000561978 ELP1O95163 1332 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 ZNF213O14771 459 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 FIBPO43427 364 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 FGAP02671 866 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 SMARCC2Q8TAQ2 1214 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 MYH7P12883 1935 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 IRS2Q9Y4H2 1338 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 H3BQV1 296 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 GPAA1O43292 621 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 MCM5P33992 734 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 GYG1P46976 350 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 SCRN1Q12765 414 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
PCAT1-202ENST00000561978 PUS7LQ9H0K6 701 aaKnown RBP13.62□□□□□ -0.23
PCAT1-202ENST00000561978 GJA3Q9Y6H8 435 aa13.62□□□□□ -0.23
PCAT1-202ENST00000561978 LAMA4Q16363 1823 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 ZC3H4Q9UPT8 1303 aaKnown RBP13.61□□□□□ -0.23
PCAT1-202ENST00000561978 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
PCAT1-202ENST00000561978 EVCP57679 992 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 CXCL9Q07325 125 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 DPY19L2Q6NUT2 758 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
PCAT1-202ENST00000561978 PHKA1P46020 1223 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 RALYLQ86SE5 291 aaKnown RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 TRDNQ13061 729 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 FAM84BQ96KN1 310 aaPredicted RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 IQSEC3Q9UPP2 1182 aaPredicted RBP13.6□□□□□ -0.23
PCAT1-202ENST00000561978 JAG2Q9Y219 1238 aa13.6□□□□□ -0.23
PCAT1-202ENST00000561978 JAK2O60674 1132 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 PDIA3P30101 505 aaKnown RBP13.59□□□□□ -0.23
PCAT1-202ENST00000561978 BCAMP50895 628 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
PCAT1-202ENST00000561978 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 COA1Q9GZY4 146 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
PCAT1-202ENST00000561978 CD209Q9NNX6 404 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 NMRK2Q9NPI5 230 aa13.59□□□□□ -0.23
PCAT1-202ENST00000561978 ARAP2Q8WZ64 1704 aa13.58□□□□□ -0.23
PCAT1-202ENST00000561978 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 PSMD14O00487 310 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 FOXP2O15409 715 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 ALX1Q15699 326 aa13.58□□□□□ -0.24
PCAT1-202ENST00000561978 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms