RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 A0A0G2JLL6 359 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-204ENST00000561662 SYN1P17600 705 aa22.87■■□□□ 1.25
COMMD4-204ENST00000561662 PRDX5P30044 214 aa22.87■■□□□ 1.25
COMMD4-204ENST00000561662 PRRT2Q7Z6L0 340 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-204ENST00000561662 CCDC84Q86UT8 332 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-204ENST00000561662 SMCR8Q8TEV9 937 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-204ENST00000561662 PAK6Q9NQU5 681 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-204ENST00000561662 IFIT1P09914 478 aaKnown RBP22.86■■□□□ 1.25
COMMD4-204ENST00000561662 FASTKD5Q7L8L6 764 aaKnown RBP22.86■■□□□ 1.25
COMMD4-204ENST00000561662 PXYLP1Q8TE99 480 aa22.86■■□□□ 1.25
COMMD4-204ENST00000561662 PICK1Q9NRD5 415 aa22.86■■□□□ 1.25
COMMD4-204ENST00000561662 UNC80Q8N2C7 3258 aa22.86■■□□□ 1.25
COMMD4-204ENST00000561662 TRIM75PA6NK02 468 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 PTPRAP18433 802 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 FGFR2P21802 821 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 MNX1P50219 401 aaPredicted RBP22.85■■□□□ 1.25
COMMD4-204ENST00000561662 PUM3Q15397 648 aaKnown RBP22.85■■□□□ 1.25
COMMD4-204ENST00000561662 SCYL3Q8IZE3 742 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 ANKRD13CQ8N6S4 541 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 WDR66Q8TBY9 1149 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 GDF15Q99988 308 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 CRISPLD2Q9H0B8 497 aa22.85■■□□□ 1.25
COMMD4-204ENST00000561662 RABL6Q3YEC7 729 aaPredicted RBP22.84■■□□□ 1.25
COMMD4-204ENST00000561662 NECAB2Q7Z6G3 386 aa22.84■■□□□ 1.25
COMMD4-204ENST00000561662 AFG3L2Q9Y4W6 797 aa22.84■■□□□ 1.25
COMMD4-204ENST00000561662 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.83■■□□□ 1.25
COMMD4-204ENST00000561662 UTYO14607 1347 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 ATRNL1Q5VV63 1379 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 RGS3P49796 1198 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 TRIM32Q13049 653 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 IRF5Q13568 498 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
COMMD4-204ENST00000561662 COA7Q96BR5 231 aa22.82■■□□□ 1.24
COMMD4-204ENST00000561662 LDHBP07195 334 aaKnown RBP22.81■■□□□ 1.24
COMMD4-204ENST00000561662 SLC5A1P13866 664 aa22.81■■□□□ 1.24
COMMD4-204ENST00000561662 TREML2Q5T2D2 321 aa22.81■■□□□ 1.24
COMMD4-204ENST00000561662 SH3BP5LQ7L8J4 393 aa22.81■■□□□ 1.24
COMMD4-204ENST00000561662 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
COMMD4-204ENST00000561662 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
COMMD4-204ENST00000561662 MYH13Q9UKX3 1938 aa22.8■■□□□ 1.24
COMMD4-204ENST00000561662 MAGEA10P43363 369 aaPredicted RBP22.8■■□□□ 1.24
COMMD4-204ENST00000561662 NCBP3Q53F19 620 aaKnown RBP22.8■■□□□ 1.24
COMMD4-204ENST00000561662 LRRFIP2Q9Y608 721 aaKnown RBP22.8■■□□□ 1.24
COMMD4-204ENST00000561662 BMP8BP34820 402 aa22.79■■□□□ 1.24
COMMD4-204ENST00000561662 LPIN2Q92539 896 aa22.79■■□□□ 1.24
COMMD4-204ENST00000561662 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
COMMD4-204ENST00000561662 DOCK2Q92608 1830 aa22.78■■□□□ 1.24
COMMD4-204ENST00000561662 DDTLA6NHG4 134 aaPredicted RBP22.78■■□□□ 1.24
COMMD4-204ENST00000561662 MTMR10Q9NXD2 777 aa22.78■■□□□ 1.24
COMMD4-204ENST00000561662 SLC45A1Q9Y2W3 748 aa22.78■■□□□ 1.24
COMMD4-204ENST00000561662 PICALMQ13492 652 aa22.77■■□□□ 1.24
COMMD4-204ENST00000561662 AGTPBP1Q9UPW5 1226 aa22.77■■□□□ 1.24
COMMD4-204ENST00000561662 STXBP5LQ9Y2K9 1186 aa22.77■■□□□ 1.24
COMMD4-204ENST00000561662 PTPRFP10586 1907 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 FAM196BA6NMK8 535 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 EYA2O00167 538 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 TDHQ8IZJ6 230 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 NBPF3Q9H094 633 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 SIL1Q9H173 461 aa22.76■■□□□ 1.23
COMMD4-204ENST00000561662 DDX4Q9NQI0 724 aaKnown RBP22.76■■□□□ 1.23
COMMD4-204ENST00000561662 HMGCRP04035 888 aa22.75■■□□□ 1.23
COMMD4-204ENST00000561662 COL25A1Q9BXS0 654 aaPredicted RBP22.75■■□□□ 1.23
COMMD4-204ENST00000561662 UBE2OQ9C0C9 1292 aaKnown RBP22.75■■□□□ 1.23
COMMD4-204ENST00000561662 C11orf49Q9H6J7 331 aa22.75■■□□□ 1.23
COMMD4-204ENST00000561662 PHIPQ8WWQ0 1821 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 CTNND1O60716 968 aaKnown RBP22.74■■□□□ 1.23
COMMD4-204ENST00000561662 PHKA1P46020 1223 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 RFX5P48382 616 aaPredicted RBP22.74■■□□□ 1.23
COMMD4-204ENST00000561662 FAM110CQ1W6H9 321 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 LRIT3Q3SXY7 679 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 GPR153Q6NV75 609 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 ATG9AQ7Z3C6 839 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 IDI2Q9BXS1 227 aa22.74■■□□□ 1.23
COMMD4-204ENST00000561662 HMX1Q9NP08 348 aaPredicted RBP22.74■■□□□ 1.23
COMMD4-204ENST00000561662 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
COMMD4-204ENST00000561662 DOCK1Q14185 1865 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 ENTPD3O75355 529 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 ATP2B3Q16720 1220 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 ANKLE1Q8NAG6 615 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 USP44Q9H0E7 712 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 RPTORQ8N122 1335 aa22.73■■□□□ 1.23
COMMD4-204ENST00000561662 PEX10O60683 326 aa22.72■■□□□ 1.23
COMMD4-204ENST00000561662 CAPN2P17655 700 aa22.72■■□□□ 1.23
COMMD4-204ENST00000561662 GNL3LQ9NVN8 582 aaKnown RBP22.72■■□□□ 1.23
COMMD4-204ENST00000561662 GJD2Q9UKL4 321 aa22.72■■□□□ 1.23
COMMD4-204ENST00000561662 VCANP13611 3396 aa22.72■■□□□ 1.23
COMMD4-204ENST00000561662 MYH2Q9UKX2 1941 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 HMGCS2P54868 508 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 MAP3K10Q02779 954 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 SPP2Q13103 211 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 PNMA3Q9UL41 463 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 RFX7Q2KHR2 1363 aa22.71■■□□□ 1.23
COMMD4-204ENST00000561662 LAMA2P24043 3122 aaKnown RBP22.7■■□□□ 1.22
COMMD4-204ENST00000561662 CYP2B6P20813 491 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 ADORA1P30542 326 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 BTDP43251 543 aa22.7■■□□□ 1.22
COMMD4-204ENST00000561662 DZIP1Q86YF9 867 aaKnown RBP22.7■■□□□ 1.22
COMMD4-204ENST00000561662 TRIB2Q92519 343 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms