RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PAG1Q9NWQ8 432 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 CSADQ9Y600 493 aa12.29□□□□□ -0.44
HERC1-212ENST00000561348 SSC5DA1L4H1 1573 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 FOXN1O15353 648 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 ATP5JP18859 108 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 USP5P45974 858 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 DCAF15Q66K64 600 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
HERC1-212ENST00000561348 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 ZKSCAN4Q969J2 545 aaPredicted RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 DDX4Q9NQI0 724 aaKnown RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
HERC1-212ENST00000561348 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 WDHD1O75717 1129 aaPredicted RBP12.27□□□□□ -0.45
HERC1-212ENST00000561348 TRPA1O75762 1119 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 SLURP2P0DP57 97 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 LBX1P52954 281 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
HERC1-212ENST00000561348 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
HERC1-212ENST00000561348 ENTPD3O75355 529 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 IGHDP01880 384 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 PDE6AP16499 860 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 PLCG2P16885 1265 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 RHBDL3P58872 404 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 VGLL4Q14135 290 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 LDLRAD1Q5T700 205 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 OPTNQ96CV9 577 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 HAUS7Q99871 368 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.26□□□□□ -0.452e-9■■■□□ 16.8
HERC1-212ENST00000561348 WBP1LQ9NX94 342 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
HERC1-212ENST00000561348 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 INPP5BP32019 993 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
HERC1-212ENST00000561348 HDAC1Q13547 482 aaPredicted RBP12.25□□□□□ -0.45
HERC1-212ENST00000561348 AAMPQ13685 434 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 SH3BP5LQ7L8J4 393 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
HERC1-212ENST00000561348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-212ENST00000561348 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 IDI2Q9BXS1 227 aa12.25□□□□□ -0.45
HERC1-212ENST00000561348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC1-212ENST00000561348 ERC2O15083 957 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 CAPN15O75808 1086 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 CHGBP05060 677 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 MX1P20591 662 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 MAST2Q6P0Q8 1798 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
HERC1-212ENST00000561348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.24□□□□□ -0.45
HERC1-212ENST00000561348 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
HERC1-212ENST00000561348 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 PCNTO95613 3336 aa12.24□□□□□ -0.45
HERC1-212ENST00000561348 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
HERC1-212ENST00000561348 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
HERC1-212ENST00000561348 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
HERC1-212ENST00000561348 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
HERC1-212ENST00000561348 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
HERC1-212ENST00000561348 FLT1P17948 1338 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 MBD4O95243 580 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 TBC1D8O95759 1140 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
HERC1-212ENST00000561348 HSPA8P11142 646 aaKnown RBP12.22□□□□□ -0.45
HERC1-212ENST00000561348 PPP4CP60510 307 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
HERC1-212ENST00000561348 ZSCAN25Q6NSZ9 544 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
HERC1-212ENST00000561348 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
HERC1-212ENST00000561348 OTOFQ9HC10 1997 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 RPAP1Q9BWH6 1393 aaPredicted RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 DOCK2Q92608 1830 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 MANSC4A6NHS7 340 aaPredicted RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 GLRX3O76003 335 aaKnown RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 ADD2P35612 726 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 GJA5P36382 358 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.45
HERC1-212ENST00000561348 PI4KBQ9UBF8 816 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 SNCAIPQ9Y6H5 919 aa12.21□□□□□ -0.45
HERC1-212ENST00000561348 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 CA12O43570 354 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 PRKAB2O43741 272 aa12.2□□□□□ -0.46
HERC1-212ENST00000561348 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
HERC1-212ENST00000561348 ZBTB48P10074 688 aaPredicted RBP12.2□□□□□ -0.46
HERC1-212ENST00000561348 CCL15Q16663 113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms