RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-221ENST00000561276 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-221ENST00000561276 CHMLP26374 656 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 TCP10Q12799 353 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 PICALMQ13492 652 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 RASA3Q14644 834 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 MCMDC2Q4G0Z9 681 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 DLK2Q6UY11 383 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
LRRC28-221ENST00000561276 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-221ENST00000561276 DEFB129Q9H1M3 183 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 BAZ2AQ9UIF9 1905 aaKnown RBP12.35□□□□□ -0.43
LRRC28-221ENST00000561276 CNTNAP1P78357 1384 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 ADM5C9JUS6 153 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 ENTPD3O75355 529 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 USP5P45974 858 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 PRAMEF18Q5VWM3 479 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 FAM151AQ8WW52 585 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
LRRC28-221ENST00000561276 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
LRRC28-221ENST00000561276 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
LRRC28-221ENST00000561276 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
LRRC28-221ENST00000561276 GPAA1O43292 621 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 PRKAB2O43741 272 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 FMR1Q06787 632 aaKnown RBP eCLIP12.34□□□□□ -0.43
LRRC28-221ENST00000561276 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 RUFY2Q8WXA3 655 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 TMEM39BQ9GZU3 492 aa12.34□□□□□ -0.43
LRRC28-221ENST00000561276 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 TRAF5O00463 557 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 APPP05067 770 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 GNAT2P19087 354 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 FSTL1Q12841 308 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-221ENST00000561276 TEPSINQ96N21 525 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 OSBPL5Q9H0X9 879 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-221ENST00000561276 DCP1AQ9NPI6 582 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-221ENST00000561276 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 FLT1P17948 1338 aa12.33□□□□□ -0.44
LRRC28-221ENST00000561276 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 CDC45O75419 566 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 MFAP1P55081 439 aaKnown RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 NBPF12Q5TAG4 269 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 IL25Q9H293 177 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 SAP30BPQ9UHR5 308 aaKnown RBP12.32□□□□□ -0.44
LRRC28-221ENST00000561276 PALD1Q9ULE6 856 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
LRRC28-221ENST00000561276 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 SH3BP5LQ7L8J4 393 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 IFNL3Q8IZI9 196 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
LRRC28-221ENST00000561276 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
LRRC28-221ENST00000561276 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 USP17L21D6R901 530 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 SGSM2O43147 1006 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
LRRC28-221ENST00000561276 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
LRRC28-221ENST00000561276 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
LRRC28-221ENST00000561276 SLC4A8Q2Y0W8 1093 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 CST9Q5W186 159 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 MIGA2Q7L4E1 593 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 PASKQ96RG2 1323 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
LRRC28-221ENST00000561276 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
LRRC28-221ENST00000561276 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
LRRC28-221ENST00000561276 FOXP2O15409 715 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 NF2P35240 595 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 PLCD1P51178 756 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 FOXP4Q8IVH2 680 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-221ENST00000561276 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 FZD1Q9UP38 647 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 RAD50Q92878 1312 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 MYH8P13535 1937 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
LRRC28-221ENST00000561276 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms