RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.65■□□□□ 0.74
LMX1B-204ENST00000561065 DBNLQ9UJU6 430 aaKnown RBP19.65■□□□□ 0.74
LMX1B-204ENST00000561065 GPR75-ASB3A0A0A6YYF3 556 aa19.64■□□□□ 0.73
LMX1B-204ENST00000561065 RGS19P49795 217 aa19.64■□□□□ 0.73
LMX1B-204ENST00000561065 GTF2A2P52657 109 aa19.64■□□□□ 0.73
LMX1B-204ENST00000561065 ATAD5Q96QE3 1844 aa19.64■□□□□ 0.73
LMX1B-204ENST00000561065 BRCA2P51587 3418 aa19.63■□□□□ 0.73
LMX1B-204ENST00000561065 DDTLA6NHG4 134 aaPredicted RBP19.63■□□□□ 0.73
LMX1B-204ENST00000561065 ENTPD3O75355 529 aa19.63■□□□□ 0.73
LMX1B-204ENST00000561065 UQCRFS1P1P0C7P4 283 aa19.63■□□□□ 0.73
LMX1B-204ENST00000561065 PPIL2Q13356 520 aa19.63■□□□□ 0.73
LMX1B-204ENST00000561065 SNRKQ9NRH2 765 aa19.63■□□□□ 0.73
LMX1B-204ENST00000561065 SOX10P56693 466 aa19.62■□□□□ 0.73
LMX1B-204ENST00000561065 PICALMQ13492 652 aa19.62■□□□□ 0.73
LMX1B-204ENST00000561065 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
LMX1B-204ENST00000561065 SLF2Q8IX21 1173 aa19.62■□□□□ 0.73
LMX1B-204ENST00000561065 EAF2Q96CJ1 260 aaPredicted RBP19.62■□□□□ 0.73
LMX1B-204ENST00000561065 EXOC6BQ9Y2D4 811 aa19.62■□□□□ 0.73
LMX1B-204ENST00000561065 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
LMX1B-204ENST00000561065 PHF20L1A8MW92 1017 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 PKN2Q16513 984 aaKnown RBP19.61■□□□□ 0.73
LMX1B-204ENST00000561065 TTC39AQ5SRH9 613 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 OTUD7BQ6GQQ9 843 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 FBXO46Q6PJ61 603 aaPredicted RBP19.61■□□□□ 0.73
LMX1B-204ENST00000561065 OTOP1Q7RTM1 612 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 CD99L2Q8TCZ2 262 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 RAI14Q9P0K7 980 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
LMX1B-204ENST00000561065 BTBD19C9JJ37 291 aa19.6■□□□□ 0.73
LMX1B-204ENST00000561065 CYP2E1P05181 493 aaPredicted RBP19.6■□□□□ 0.73
LMX1B-204ENST00000561065 PPATQ06203 517 aa19.6■□□□□ 0.73
LMX1B-204ENST00000561065 TAF1CQ15572 869 aaPredicted RBP19.6■□□□□ 0.73
LMX1B-204ENST00000561065 CCDC8Q9H0W5 538 aaPredicted RBP19.6■□□□□ 0.73
LMX1B-204ENST00000561065 COG6Q9Y2V7 657 aa19.6■□□□□ 0.73
LMX1B-204ENST00000561065 ZAP70P43403 619 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 SNAPC2Q13487 334 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 MOGSQ13724 837 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 ADGRA1Q86SQ6 560 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 ZNF512BQ96KM6 892 aaPredicted RBP19.59■□□□□ 0.73
LMX1B-204ENST00000561065 KCNH4Q9UQ05 1017 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 TRIM17Q9Y577 477 aa19.59■□□□□ 0.73
LMX1B-204ENST00000561065 CETPP11597 493 aa19.58■□□□□ 0.73
LMX1B-204ENST00000561065 CCDC158Q5M9N0 1113 aa19.58■□□□□ 0.73
LMX1B-204ENST00000561065 ZSCAN29Q8IWY8 852 aaPredicted RBP19.58■□□□□ 0.73
LMX1B-204ENST00000561065 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.73
LMX1B-204ENST00000561065 PIH1D3Q9NQM4 214 aaKnown RBP19.58■□□□□ 0.73
LMX1B-204ENST00000561065 LRP2BPQ9P2M1 347 aa19.58■□□□□ 0.73
LMX1B-204ENST00000561065 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.58■□□□□ 0.73
LMX1B-204ENST00000561065 RBBP6Q7Z6E9 1792 aaKnown RBP19.57■□□□□ 0.72
LMX1B-204ENST00000561065 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 GSTO1P78417 241 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 SP3Q02447 781 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 ERO1AQ96HE7 468 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 ZBTB40Q9NUA8 1239 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 NDUFB9Q9Y6M9 179 aa19.57■□□□□ 0.72
LMX1B-204ENST00000561065 DDX60LQ5H9U9 1706 aaKnown RBP19.57■□□□□ 0.72
LMX1B-204ENST00000561065 NPM3O75607 178 aaKnown RBP19.56■□□□□ 0.72
LMX1B-204ENST00000561065 LDHCP07864 332 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 MLLT1Q03111 559 aaPredicted RBP19.56■□□□□ 0.72
LMX1B-204ENST00000561065 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 SCYL3Q8IZE3 742 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
LMX1B-204ENST00000561065 OSBPL5Q9H0X9 879 aaPredicted RBP19.56■□□□□ 0.72
LMX1B-204ENST00000561065 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 ADGRA2Q96PE1 1338 aa19.56■□□□□ 0.72
LMX1B-204ENST00000561065 NAA16Q6N069 864 aaPredicted RBP19.55■□□□□ 0.72
LMX1B-204ENST00000561065 IL1RAPL2Q9NP60 686 aa19.55■□□□□ 0.72
LMX1B-204ENST00000561065 ZCCHC17Q9NP64 241 aaKnown RBP19.55■□□□□ 0.72
LMX1B-204ENST00000561065 AATFQ9NY61 560 aaKnown RBP eCLIP19.55■□□□□ 0.72
LMX1B-204ENST00000561065 DDX19BQ9UMR2 479 aa19.55■□□□□ 0.72
LMX1B-204ENST00000561065 MKI67P46013 3256 aaKnown RBP19.54■□□□□ 0.72
LMX1B-204ENST00000561065 CCDC84Q86UT8 332 aaPredicted RBP19.54■□□□□ 0.72
LMX1B-204ENST00000561065 AACSQ86V21 672 aa19.54■□□□□ 0.72
LMX1B-204ENST00000561065 TEX11Q8IYF3 940 aa19.54■□□□□ 0.72
LMX1B-204ENST00000561065 MYH1P12882 1939 aa19.54■□□□□ 0.72
LMX1B-204ENST00000561065 TLR2O60603 784 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
LMX1B-204ENST00000561065 PTPRAP18433 802 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 ANKRD23Q86SG2 305 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 ERC1Q8IUD2 1116 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 RHPN1Q8TCX5 695 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 ARHGAP39Q9C0H5 1083 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 ANTXR1Q9H6X2 564 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 MGAMO43451 1857 aa19.53■□□□□ 0.72
LMX1B-204ENST00000561065 RRP1BQ14684 758 aaKnown RBP19.52■□□□□ 0.72
LMX1B-204ENST00000561065 GPAT2Q6NUI2 795 aa19.52■□□□□ 0.72
LMX1B-204ENST00000561065 EFCC1Q9HA90 598 aa19.52■□□□□ 0.72
LMX1B-204ENST00000561065 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.72
LMX1B-204ENST00000561065 FLT1P17948 1338 aa19.52■□□□□ 0.72
LMX1B-204ENST00000561065 A0A0G2JLL6 359 aaPredicted RBP19.51■□□□□ 0.71
LMX1B-204ENST00000561065 PDHXO00330 501 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 TBC1D12O60347 775 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 PPP4CP60510 307 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 PRRT2Q7Z6L0 340 aaPredicted RBP19.51■□□□□ 0.71
LMX1B-204ENST00000561065 AFG3L2Q9Y4W6 797 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 ZHX2Q9Y6X8 837 aa19.51■□□□□ 0.71
LMX1B-204ENST00000561065 NAV1Q8NEY1 1877 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms