RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 CBX1P83916 185 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 PNOCQ13519 176 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 PAXBP1Q9Y5B6 917 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 ATP1A3P13637 1013 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 PTPN14Q15678 1187 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 ARMCX5Q6P1M9 558 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 ARAP2Q8WZ64 1704 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 U2AF2P26368 475 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX22-206ENST00000560997 GSDMDP57764 484 aa11.31□□□□□ -0.6
SNX22-206ENST00000560997 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX22-206ENST00000560997 DOCK2Q92608 1830 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 PPP6R2O75170 966 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 SLC5A1P13866 664 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 ALX1Q15699 326 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 IL6STP40189 918 aaPredicted RBP11.3□□□□□ -0.6
SNX22-206ENST00000560997 BCAMP50895 628 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 RESP18Q5W5W9 173 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 A0A0G2JS52 829 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 TRIM29Q14134 588 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
SNX22-206ENST00000560997 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 TOMM22Q9NS69 142 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 TUBE1Q9UJT0 475 aa11.3□□□□□ -0.6
SNX22-206ENST00000560997 LIFRP42702 1097 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 FANCCQ00597 558 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
SNX22-206ENST00000560997 LONRF3Q496Y0 759 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
SNX22-206ENST00000560997 METTL16Q86W50 562 aaKnown RBP11.29□□□□□ -0.6
SNX22-206ENST00000560997 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 DPF2Q92785 391 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 TIGD1Q96MW7 591 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 MPHOSPH8Q99549 860 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 FOXN1O15353 648 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 FMNL1O95466 1100 aaPredicted RBP11.29□□□□□ -0.6
SNX22-206ENST00000560997 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
SNX22-206ENST00000560997 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
SNX22-206ENST00000560997 TDO2P48775 406 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 GRIN1Q05586 938 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
SNX22-206ENST00000560997 TIAM2Q8IVF5 1701 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 TPM4P67936 248 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX22-206ENST00000560997 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
SNX22-206ENST00000560997 SLC4A4Q9Y6R1 1079 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 V9GYY5 206 aaPredicted RBP11.28□□□□□ -0.6
SNX22-206ENST00000560997 FAM237AA0A1B0GTK4 181 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 EXOC5O00471 708 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 IKBKBO14920 756 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 IFNAR1P17181 557 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 SFPQP23246 707 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX22-206ENST00000560997 TOB1P50616 345 aaPredicted RBP11.28□□□□□ -0.6
SNX22-206ENST00000560997 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 CCDC150Q8NCX0 1101 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 KCNH3Q9ULD8 1083 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 COL4A1P02462 1669 aa11.28□□□□□ -0.6
SNX22-206ENST00000560997 CUTAO60888 179 aa11.27□□□□□ -0.6
SNX22-206ENST00000560997 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.6
SNX22-206ENST00000560997 SYCP1Q15431 976 aa11.27□□□□□ -0.6
SNX22-206ENST00000560997 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.6
SNX22-206ENST00000560997 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.6
SNX22-206ENST00000560997 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.6
SNX22-206ENST00000560997 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.6
SNX22-206ENST00000560997 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.6
SNX22-206ENST00000560997 PCDHA5Q9Y5H7 936 aa11.27□□□□□ -0.6
SNX22-206ENST00000560997 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 MMP1P03956 469 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 BMP6P22004 513 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 PDE4BQ07343 736 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 RTN1Q16799 776 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 KRBA2Q6ZNG9 492 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms