RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 C9orf78Q9NZ63 289 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 MAST3O60307 1309 aa11.31□□□□□ -0.6
RABGGTA-217ENST00000560521 PDE8BO95263 885 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 PTPRAP18433 802 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 CCDC27Q2M243 656 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 SLC45A1Q9Y2W3 748 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 LAMA2P24043 3122 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-217ENST00000560521 TRIM32Q13049 653 aa11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 COA7Q96BR5 231 aa11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 PRKRIP1Q9H875 184 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-217ENST00000560521 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 MAST2Q6P0Q8 1798 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 DNAH12Q6ZR08 3092 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 ANKRD13CQ8N6S4 541 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 GUCD1Q96NT3 240 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 GJD2Q9UKL4 321 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
RABGGTA-217ENST00000560521 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 HMGCRP04035 888 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 FGFR2P21802 821 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 TREML2Q5T2D2 321 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 WDR66Q8TBY9 1149 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 USP40Q9NVE5 1235 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 OGDHLQ9ULD0 1010 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 PFASO15067 1338 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 IL16Q14005 1332 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 RLFQ13129 1914 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 PRUNE2Q8WUY3 3088 aa11.27□□□□□ -0.61
RABGGTA-217ENST00000560521 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 PRDX5P30044 214 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 FAM110CQ1W6H9 321 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 SRCIN1Q9C0H9 1055 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 PICK1Q9NRD5 415 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 UTYO14607 1347 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
RABGGTA-217ENST00000560521 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 TRIM75PA6NK02 468 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 RGS3P49796 1198 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
RABGGTA-217ENST00000560521 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 CTNND1O60716 968 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 ENTPD3O75355 529 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 COL6A1P12109 1028 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 TRIB2Q92519 343 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 ZNFX1Q9P2E3 1918 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
RABGGTA-217ENST00000560521 MYO5AQ9Y4I1 1855 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 PUM3Q15397 648 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 SMCHD1A6NHR9 2005 aa11.23□□□□□ -0.61
RABGGTA-217ENST00000560521 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-217ENST00000560521 CYP2B6P20813 491 aa11.22□□□□□ -0.61
RABGGTA-217ENST00000560521 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms