RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 HAND2P61296 217 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 EXOSC10Q01780 885 aaKnown RBP10.19□□□□□ -0.78
TRAF3-209ENST00000560463 PPARAQ07869 468 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 CTR9Q6PD62 1173 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 KIAA0825Q8IV33 1275 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 TEX11Q8IYF3 940 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 GMLQ99445 158 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
TRAF3-209ENST00000560463 HDAC9Q9UKV0 1011 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 TAF6LQ9Y6J9 622 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 ROBO3Q96MS0 1386 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 USP17L21D6R901 530 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 PSMD14O00487 310 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 FGRP09769 529 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 CPA1P15085 419 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 RPS12P25398 132 aaKnown RBP10.18□□□□□ -0.78
TRAF3-209ENST00000560463 RHBDL3P58872 404 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 CIAPIN1Q6FI81 312 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 OGFOD1Q8N543 542 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 TGFBRAP1Q8WUH2 860 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 SH2B1Q9NRF2 756 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-209ENST00000560463 LIMCH1Q9UPQ0 1083 aa10.18□□□□□ -0.78
TRAF3-209ENST00000560463 MINDY4BA8MYZ0 360 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 FZD9O00144 591 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 NPM3O75607 178 aaKnown RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 RAD17O75943 681 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 SCNN1DP51172 638 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 FGD1P98174 961 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 CTDSPL2Q05D32 466 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 CXCL9Q07325 125 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 PDE4BQ07343 736 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 TOB2Q14106 344 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 C12orf60Q5U649 245 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 APOBEC3HQ6NTF7 200 aaKnown RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 TBC1D10CQ8IV04 446 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 MB21D2Q8IYB1 491 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 MTMR14Q8NCE2 650 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 INTS4Q96HW7 963 aaKnown RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 TMX3Q96JJ7 454 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 MCM9Q9NXL9 1143 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
TRAF3-209ENST00000560463 COL2A1P02458 1487 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-209ENST00000560463 FLT1P17948 1338 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 PRC1O43663 620 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 ORC4O43929 436 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 USP17L8P0C7I0 530 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 LMNB1P20700 586 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 RBM5P52756 815 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAF3-209ENST00000560463 RASSF7Q02833 373 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 CUL4AQ13619 759 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 CDC42EP5Q6NZY7 148 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 Q6ZUG5 572 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 ESR2Q92731 530 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 TMEM87BQ96K49 555 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 IDI2Q9BXS1 227 aa10.16□□□□□ -0.78
TRAF3-209ENST00000560463 NEDD4P46934 1319 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 WDHD1O75717 1129 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 POLR3DP05423 398 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 EVCP57679 992 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 SART3Q15020 963 aaKnown RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 MAPKAPK5Q8IW41 473 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 DPF2Q92785 391 aa10.15□□□□□ -0.78
TRAF3-209ENST00000560463 ZNF274Q96GC6 653 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 DHX36Q9H2U1 1008 aaKnown RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 CWC22Q9HCG8 908 aaKnown RBP10.15□□□□□ -0.78
TRAF3-209ENST00000560463 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
TRAF3-209ENST00000560463 ERICH2A1L162 156 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 SPDYE2BA6NHP3 402 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 B4E1Z4 1266 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 KDM4AO75164 1064 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 SPDYE6P0CI01 402 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 LIFRP42702 1097 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 ANTXR2P58335 489 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 DLGAP5Q15398 846 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 BRF1Q92994 677 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 OSBPL5Q9H0X9 879 aaPredicted RBP10.14□□□□□ -0.79
TRAF3-209ENST00000560463 TOMM22Q9NS69 142 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 TMOD2Q9NZR1 351 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 ZSWIM5Q9P217 1185 aa10.14□□□□□ -0.79
TRAF3-209ENST00000560463 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
TRAF3-209ENST00000560463 ANGEL1Q9UNK9 670 aaKnown RBP10.14□□□□□ -0.79
TRAF3-209ENST00000560463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAF3-209ENST00000560463 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms