RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CPNE3O75131 537 aaKnown RBP6.22□□□□□ -1.41
SPG11-222ENST00000560435 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
SPG11-222ENST00000560435 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
SPG11-222ENST00000560435 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
SPG11-222ENST00000560435 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
SPG11-222ENST00000560435 BRPF3Q9ULD4 1205 aa6.22□□□□□ -1.41
SPG11-222ENST00000560435 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 TSPAN15O95858 294 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 NEFMP07197 916 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 ITIH2P19823 946 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 RAP1GAPP47736 663 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 MLANAQ16655 118 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 ISL2Q96A47 359 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 PPP1R16BQ96T49 567 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 EGFL7Q9UHF1 273 aa6.21□□□□□ -1.42
SPG11-222ENST00000560435 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.2□□□□□ -1.42
SPG11-222ENST00000560435 CFPP27918 469 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 ZNF157P51786 506 aaPredicted RBP6.2□□□□□ -1.42
SPG11-222ENST00000560435 ORC1Q13415 861 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 C1QL4Q86Z23 238 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 ZSCAN18Q8TBC5 510 aaPredicted RBP6.2□□□□□ -1.42
SPG11-222ENST00000560435 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
SPG11-222ENST00000560435 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 TRAK1Q9UPV9 953 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 CTNND2Q9UQB3 1225 aa6.2□□□□□ -1.42
SPG11-222ENST00000560435 IGF2BP3O00425 579 aaKnown RBP eCLIP6.19□□□□□ -1.42
SPG11-222ENST00000560435 ICMTO60725 284 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 ZP2Q05996 745 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 IKZF1Q13422 519 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 PDZD3Q86UT5 571 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
SPG11-222ENST00000560435 CCER1Q8TC90 406 aaPredicted RBP6.19□□□□□ -1.42
SPG11-222ENST00000560435 CCDC74AQ96AQ1 378 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 FAM129BQ96TA1 746 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
SPG11-222ENST00000560435 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
SPG11-222ENST00000560435 ZNF865P0CJ78 1059 aaPredicted RBP6.18□□□□□ -1.42
SPG11-222ENST00000560435 ERVK-24P63145 666 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 SIAH1Q8IUQ4 282 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 SPACA3Q8IXA5 215 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 LRRC56Q8IYG6 542 aaPredicted RBP6.18□□□□□ -1.42
SPG11-222ENST00000560435 RNF214Q8ND24 703 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
SPG11-222ENST00000560435 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 SSU72Q9NP77 194 aaKnown RBP6.18□□□□□ -1.42
SPG11-222ENST00000560435 GTF2IRD1Q9UHL9 959 aa6.18□□□□□ -1.42
SPG11-222ENST00000560435 NDUFB5O43674 189 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 PPP1R15AO75807 674 aaPredicted RBP6.17□□□□□ -1.42
SPG11-222ENST00000560435 AFMP43652 599 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
SPG11-222ENST00000560435 LCNL1Q6ZST4 164 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 KCNB2Q92953 911 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
SPG11-222ENST00000560435 GLI1P08151 1106 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 CLCN7P51798 805 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 GRM2Q14416 872 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 ECM1Q16610 540 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 LILRA6Q6PI73 481 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 ANKLE2Q86XL3 938 aa6.16□□□□□ -1.42
SPG11-222ENST00000560435 GPN3Q9UHW5 284 aaPredicted RBP6.16□□□□□ -1.42
SPG11-222ENST00000560435 H3BRB1 525 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
SPG11-222ENST00000560435 NKPD1Q17RQ9 610 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 FYB2Q5VWT5 728 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 DTHD1Q6ZMT9 781 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 SYDE1Q6ZW31 735 aaPredicted RBP6.15□□□□□ -1.42
SPG11-222ENST00000560435 GLYCTKQ8IVS8 523 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 CITED4Q96RK1 184 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 TUT1Q9H6E5 874 aaKnown RBP6.15□□□□□ -1.42
SPG11-222ENST00000560435 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.42
SPG11-222ENST00000560435 PITPNM2Q9BZ72 1349 aa6.15□□□□□ -1.43
SPG11-222ENST00000560435 ARHGAP4P98171 946 aa6.14□□□□□ -1.43
SPG11-222ENST00000560435 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
SPG11-222ENST00000560435 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
SPG11-222ENST00000560435 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
SPG11-222ENST00000560435 NCANO14594 1321 aa6.14□□□□□ -1.43
SPG11-222ENST00000560435 GNAT3A8MTJ3 354 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 IGHA2P01877 340 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 ZSCAN22P10073 491 aaPredicted RBP6.13□□□□□ -1.43
SPG11-222ENST00000560435 ARNTP27540 789 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 MPZL3Q6UWV2 235 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 STK35Q8TDR2 534 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 RAPGEFL1Q9UHV5 662 aa6.13□□□□□ -1.43
SPG11-222ENST00000560435 GPR182O15218 404 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 KRT1P04264 644 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
SPG11-222ENST00000560435 FCGRTP55899 365 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 GPBAR1Q8TDU6 330 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 EMILIN2Q9BXX0 1053 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
SPG11-222ENST00000560435 CARNS1A5YM72 827 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 PRRG2O14669 202 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms