RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 ARHGAP27Q6ZUM4 889 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 STOX1Q6ZVD7 989 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 ZNF467Q7Z7K2 595 aaPredicted RBP8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 CERS3Q8IU89 383 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 KIAA0825Q8IV33 1275 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 SDR42E1Q8WUS8 393 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 SNX21Q969T3 373 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 NOL10Q9BSC4 688 aaKnown RBP8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 CRNKL1Q9BZJ0 848 aaKnown RBP8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 SCUBE2Q9NQ36 999 aa8.62□□□□□ -1.03
HMBOX1-214ENST00000560357 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 BAZ2AQ9UIF9 1905 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 FZD9O00144 591 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 ZNF213O14771 459 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 CD2BP2O95400 341 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 PLCG2P16885 1265 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.033e-9■■■□□ 15.5
HMBOX1-214ENST00000560357 PSMA5P28066 241 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 CRKP46108 304 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 TDO2P48775 406 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 NEK4P51957 841 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 RHBDL3P58872 404 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 HAND2P61296 217 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 COL9A3Q14050 684 aaPredicted RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 APOBEC3HQ6NTF7 200 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 JAKMIP1Q96N16 626 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 TTC14Q96N46 770 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 UPF3BQ9BZI7 483 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 NAPBQ9H115 298 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 DCP1AQ9NPI6 582 aaPredicted RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 MKRN1Q9UHC7 482 aaKnown RBP8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 SBF1O95248 1867 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 LAMA4Q16363 1823 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 ADAMTSL1Q8N6G6 1762 aa8.61□□□□□ -1.03
HMBOX1-214ENST00000560357 DICER1Q9UPY3 1922 aaKnown RBP8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 E7EWF7 191 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 ST18O60284 1047 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 CPA1P15085 419 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 LMNB1P20700 586 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 CASTP20810 708 aaKnown RBP8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 BECN1Q14457 450 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 TNIP1Q15025 636 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 SBK1Q52WX2 424 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 CTR9Q6PD62 1173 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 RUFY3Q7L099 469 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 AGBL3Q8NEM8 1001 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 CYP46A1Q9Y6A2 500 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 TACC3Q9Y6A5 838 aa8.6□□□□□ -1.03
HMBOX1-214ENST00000560357 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 USP17L21D6R901 530 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 USP5P45974 858 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 CTDSPL2Q05D32 466 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 PPARAQ07869 468 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 CDC42EP5Q6NZY7 148 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 TBC1D10CQ8IV04 446 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 ALDH8A1Q9H2A2 487 aaPredicted RBP8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 PCDHAC2Q9Y5I4 1007 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
HMBOX1-214ENST00000560357 TIAM2Q8IVF5 1701 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 CYP2D7A0A087X1C5 515 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 MINDY4BA8MYZ0 360 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 K7ELQ4 463 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 WDHD1O75717 1129 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 FGRP09769 529 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 CYP2D6P10635 497 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 RPS12P25398 132 aaKnown RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 RBM5P52756 815 aaKnown RBP eCLIP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 IRX5P78411 483 aaPredicted RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 EXOSC10Q01780 885 aaKnown RBP8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 AKNAD1Q5T1N1 836 aa8.58□□□□□ -1.04
HMBOX1-214ENST00000560357 C12orf60Q5U649 245 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms