RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 ZSWIM9Q86XI8 627 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 TOP6BLQ8N6T0 577 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 TUT1Q9H6E5 874 aaKnown RBP5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 PRDM7Q9NQW5 492 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 KRT82Q9NSB4 513 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 PLAGL2Q9UPG8 496 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 TRAK1Q9UPV9 953 aa5.58□□□□□ -1.52
AC066612.1-201ENST00000560339 ICMTO60725 284 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 PPP2R3AQ06190 1150 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 FAAP100Q0VG06 881 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 KCNMB1Q16558 191 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 PRPF40BQ6NWY9 871 aaKnown RBP5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 DTHD1Q6ZMT9 781 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 TMC1Q8TDI8 760 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 CCDC74AQ96AQ1 378 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 EGFL7Q9UHF1 273 aa5.57□□□□□ -1.52
AC066612.1-201ENST00000560339 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 IKZF1Q13422 519 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 FLAD1Q8NFF5 587 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 ASB11Q8WXH4 323 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 ISL2Q96A47 359 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 TOX2Q96NM4 488 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 PCDHGC5Q9Y5F6 944 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 SNX11Q9Y5W9 270 aa5.56□□□□□ -1.52
AC066612.1-201ENST00000560339 EIF1AYO14602 144 aaKnown RBP5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 NEFMP07197 916 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 ZP2Q05996 745 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 CCDC82Q8N4S0 544 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 DNAJC25Q9H1X3 360 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 PPP4R2Q9NY27 417 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 GTF2IRD1Q9UHL9 959 aa5.55□□□□□ -1.52
AC066612.1-201ENST00000560339 SERPINB4P48594 390 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 FCGRTP55899 365 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 GRM2Q14416 872 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 ACSBG1Q96GR2 724 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 FAM129BQ96TA1 746 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 NIF3L1Q9GZT8 377 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
AC066612.1-201ENST00000560339 ZNF503-AS2A6NEH8 195 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 MAP1SQ66K74 1059 aaPredicted RBP5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 B4GALNT3Q6L9W6 998 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 MPZL3Q6UWV2 235 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 SULF2Q8IWU5 870 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 RNF214Q8ND24 703 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 ZSCAN18Q8TBC5 510 aaPredicted RBP5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 HEXIM2Q96MH2 286 aaKnown RBP5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 CITED4Q96RK1 184 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 PPP1R16BQ96T49 567 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 PICK1Q9NRD5 415 aa5.53□□□□□ -1.52
AC066612.1-201ENST00000560339 GNAT3A8MTJ3 354 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 AFMP43652 599 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 ERVK-24P63145 666 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 ARHGAP4P98171 946 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 ZC3H12AQ5D1E8 599 aaKnown RBP5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 PDZD3Q86UT5 571 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 EPS8L3Q8TE67 593 aaKnown RBP5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 CBX8Q9HC52 389 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 PRDM10Q9NQV6 1147 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 NLRP2Q9NX02 1062 aa5.52□□□□□ -1.53
AC066612.1-201ENST00000560339 IGF2BP3O00425 579 aaKnown RBP eCLIP5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 GPR182O15218 404 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 ZNF865P0CJ78 1059 aaPredicted RBP5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 ARNTP27540 789 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 CFPP27918 469 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 SYDE1Q6ZW31 735 aaPredicted RBP5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 SPACA3Q8IXA5 215 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 CSRNP1Q96S65 589 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 EMILIN2Q9BXX0 1053 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 CTNND2Q9UQB3 1225 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 AKAP2Q9Y2D5 859 aa5.51□□□□□ -1.53
AC066612.1-201ENST00000560339 TSPAN15O95858 294 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 ECM1Q16610 540 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 PPM1JQ5JR12 505 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 FYB2Q5VWT5 728 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 STK35Q8TDR2 534 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 KIRREL1Q96J84 757 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 CSADQ9Y600 493 aa5.5□□□□□ -1.53
AC066612.1-201ENST00000560339 GLI1P08151 1106 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 XRCC5P13010 732 aaKnown RBP5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 NME2P22392 152 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 CLCN7P51798 805 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 NKPD1Q17RQ9 610 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 TMEM67Q5HYA8 995 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 PRR23BQ6ZRT6 265 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 CDC37L1Q7L3B6 337 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 CYFIP1Q7L576 1253 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 FAM214BQ7L5A3 538 aa5.49□□□□□ -1.53
AC066612.1-201ENST00000560339 DCDC2CA8MYV0 355 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms