RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 INHAP05111 366 aa24.78■■□□□ 1.56
RABGGTA-214ENST00000560163 ELNP15502 786 aa24.78■■□□□ 1.56
RABGGTA-214ENST00000560163 PTPRAP18433 802 aa24.78■■□□□ 1.56
RABGGTA-214ENST00000560163 SCYL3Q8IZE3 742 aa24.78■■□□□ 1.56
RABGGTA-214ENST00000560163 CRISPLD2Q9H0B8 497 aa24.78■■□□□ 1.56
RABGGTA-214ENST00000560163 EYA2O00167 538 aa24.77■■□□□ 1.56
RABGGTA-214ENST00000560163 LRCH3Q96II8 777 aa24.77■■□□□ 1.56
RABGGTA-214ENST00000560163 SLC5A1P13866 664 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 ATG9AQ7Z3C6 839 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 DEFB118Q96PH6 123 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 IDI2Q9BXS1 227 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 STAP2Q9UGK3 403 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 PTPRFP10586 1907 aa24.76■■□□□ 1.55
RABGGTA-214ENST00000560163 ALPK3Q96L96 1907 aa24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 TFRCP02786 760 aaKnown RBP24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 SH3BP5LQ7L8J4 393 aa24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 MRS2Q9HD23 443 aa24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 SALL1Q9NSC2 1324 aa24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 PHIPQ8WWQ0 1821 aa24.75■■□□□ 1.55
RABGGTA-214ENST00000560163 ENTPD3O75355 529 aa24.74■■□□□ 1.55
RABGGTA-214ENST00000560163 LDHBP07195 334 aaKnown RBP24.74■■□□□ 1.55
RABGGTA-214ENST00000560163 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
RABGGTA-214ENST00000560163 DOCK2Q92608 1830 aa24.74■■□□□ 1.55
RABGGTA-214ENST00000560163 DOCK3Q8IZD9 2030 aa24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 RFX7Q2KHR2 1363 aa24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 TNPO2O14787 897 aaKnown RBP24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 RGS3P49796 1198 aa24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 PAWRQ96IZ0 340 aaKnown RBP24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 PICK1Q9NRD5 415 aa24.73■■□□□ 1.55
RABGGTA-214ENST00000560163 ZBTB22O15209 634 aa24.72■■□□□ 1.55
RABGGTA-214ENST00000560163 SLURP2P0DP57 97 aa24.72■■□□□ 1.55
RABGGTA-214ENST00000560163 GADL1Q6ZQY3 521 aa24.72■■□□□ 1.55
RABGGTA-214ENST00000560163 GDF15Q99988 308 aa24.72■■□□□ 1.55
RABGGTA-214ENST00000560163 GAKO14976 1311 aa24.71■■□□□ 1.55
RABGGTA-214ENST00000560163 BMP8BP34820 402 aa24.71■■□□□ 1.55
RABGGTA-214ENST00000560163 CUL9Q8IWT3 2517 aa24.7■■□□□ 1.54
RABGGTA-214ENST00000560163 PTPRCP08575 1304 aa24.7■■□□□ 1.54
RABGGTA-214ENST00000560163 DDTLA6NHG4 134 aaPredicted RBP24.7■■□□□ 1.54
RABGGTA-214ENST00000560163 CTNND1O60716 968 aaKnown RBP24.7■■□□□ 1.54
RABGGTA-214ENST00000560163 MYH2Q9UKX2 1941 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 DOCK1Q14185 1865 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 UNC80Q8N2C7 3258 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 GPR153Q6NV75 609 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 NECAB2Q7Z6G3 386 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 SMCR8Q8TEV9 937 aaPredicted RBP24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 DIS3LQ8TF46 1054 aaKnown RBP24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 GNL3LQ9NVN8 582 aaKnown RBP24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 DENND2AQ9ULE3 1009 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 AGTPBP1Q9UPW5 1226 aa24.69■■□□□ 1.54
RABGGTA-214ENST00000560163 SEMA3EO15041 775 aa24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 ANKRD13CQ8N6S4 541 aa24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 COA7Q96BR5 231 aa24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 FAM163AQ96GL9 167 aaPredicted RBP24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 DDX4Q9NQI0 724 aaKnown RBP24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 FBXO3Q9UK99 471 aa24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 LRRFIP2Q9Y608 721 aaKnown RBP24.68■■□□□ 1.54
RABGGTA-214ENST00000560163 TRIM75PA6NK02 468 aa24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 PHKA1P46020 1223 aa24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 ATP2B3Q16720 1220 aa24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 FAM110CQ1W6H9 321 aa24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 ANKLE1Q8NAG6 615 aa24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.67■■□□□ 1.54
RABGGTA-214ENST00000560163 CIAO1O76071 339 aa24.66■■□□□ 1.54
RABGGTA-214ENST00000560163 MNX1P50219 401 aaPredicted RBP24.66■■□□□ 1.54
RABGGTA-214ENST00000560163 TREML2Q5T2D2 321 aa24.66■■□□□ 1.54
RABGGTA-214ENST00000560163 ZNF521Q96K83 1311 aa24.65■■□□□ 1.54
RABGGTA-214ENST00000560163 CCDC84Q86UT8 332 aaPredicted RBP24.65■■□□□ 1.54
RABGGTA-214ENST00000560163 ZSCAN29Q8IWY8 852 aaPredicted RBP24.65■■□□□ 1.54
RABGGTA-214ENST00000560163 CEP126Q9P2H0 1117 aa24.65■■□□□ 1.54
RABGGTA-214ENST00000560163 GJD2Q9UKL4 321 aa24.65■■□□□ 1.54
RABGGTA-214ENST00000560163 TBC1D12O60347 775 aa24.64■■□□□ 1.54
RABGGTA-214ENST00000560163 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.54
RABGGTA-214ENST00000560163 SIL1Q9H173 461 aa24.64■■□□□ 1.54
RABGGTA-214ENST00000560163 TAOK2Q9UL54 1235 aa24.64■■□□□ 1.54
RABGGTA-214ENST00000560163 LAMA2P24043 3122 aaKnown RBP24.64■■□□□ 1.53
RABGGTA-214ENST00000560163 ZGPATQ8N5A5 531 aaKnown RBP24.63■■□□□ 1.53
RABGGTA-214ENST00000560163 SSH1Q8WYL5 1049 aa24.63■■□□□ 1.53
RABGGTA-214ENST00000560163 HMGCRP04035 888 aa24.62■■□□□ 1.53
RABGGTA-214ENST00000560163 CCDC102BQ68D86 513 aa24.62■■□□□ 1.53
RABGGTA-214ENST00000560163 C7orf61Q8IZ16 206 aa24.62■■□□□ 1.53
RABGGTA-214ENST00000560163 PNMA3Q9UL41 463 aa24.62■■□□□ 1.53
RABGGTA-214ENST00000560163 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 RHBDL3P58872 404 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 TRIM32Q13049 653 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 LRIT3Q3SXY7 679 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 DEFB123Q8N688 67 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 ZMYND8Q9ULU4 1186 aaPredicted RBP24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 LOC285556D6RIA3 1793 aa24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 PDS5AQ29RF7 1337 aaKnown RBP24.61■■□□□ 1.53
RABGGTA-214ENST00000560163 NPM3O75607 178 aaKnown RBP24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 ADORA1P30542 326 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 BTDP43251 543 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 GCLCP48506 637 aaPredicted RBP24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 PICALMQ13492 652 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 RASGRF1Q13972 1273 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 ZNF384Q8TF68 577 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 NBPF3Q9H094 633 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 PLXNB2O15031 1838 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms