RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 MAP4K4O95819 1239 aaPredicted RBP25.12■■□□□ 1.61
CHRNA3-207ENST00000559941 SNAPC2Q13487 334 aa25.12■■□□□ 1.61
CHRNA3-207ENST00000559941 NOL9Q5SY16 702 aaKnown RBP25.12■■□□□ 1.61
CHRNA3-207ENST00000559941 FBXO46Q6PJ61 603 aaPredicted RBP25.12■■□□□ 1.61
CHRNA3-207ENST00000559941 ZNF512BQ96KM6 892 aaPredicted RBP25.12■■□□□ 1.61
CHRNA3-207ENST00000559941 NPM3O75607 178 aaKnown RBP25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 MAP3K10Q02779 954 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 TAF1CQ15572 869 aaPredicted RBP25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 ZSCAN29Q8IWY8 852 aaPredicted RBP25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 FAM43AQ8N2R8 423 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 ZFYVE28Q9HCC9 887 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 SNRKQ9NRH2 765 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 LRP2BPQ9P2M1 347 aa25.11■■□□□ 1.61
CHRNA3-207ENST00000559941 MAST2Q6P0Q8 1798 aa25.1■■□□□ 1.61
CHRNA3-207ENST00000559941 DDTLA6NHG4 134 aaPredicted RBP25.1■■□□□ 1.61
CHRNA3-207ENST00000559941 PICALMQ13492 652 aa25.1■■□□□ 1.61
CHRNA3-207ENST00000559941 ZCCHC17Q9NP64 241 aaKnown RBP25.1■■□□□ 1.61
CHRNA3-207ENST00000559941 DBNLQ9UJU6 430 aaKnown RBP25.1■■□□□ 1.61
CHRNA3-207ENST00000559941 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 SP3Q02447 781 aa25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 MLLT1Q03111 559 aaPredicted RBP25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 EAF2Q96CJ1 260 aaPredicted RBP25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 CCDC8Q9H0W5 538 aaPredicted RBP25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 RCAN3Q9UKA8 241 aa25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 KCNH4Q9UQ05 1017 aa25.09■■□□□ 1.61
CHRNA3-207ENST00000559941 BTBD19C9JJ37 291 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 CYP2E1P05181 493 aaPredicted RBP25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 OTOP1Q7RTM1 612 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 ERC1Q8IUD2 1116 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 CD99L2Q8TCZ2 262 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 TLR7Q9NYK1 1049 aaKnown RBP25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 DDX19BQ9UMR2 479 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 EXOC6BQ9Y2D4 811 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 TRIM17Q9Y577 477 aa25.08■■□□□ 1.61
CHRNA3-207ENST00000559941 IGSF3O75054 1194 aa25.07■■□□□ 1.6
CHRNA3-207ENST00000559941 COG6Q9Y2V7 657 aa25.07■■□□□ 1.6
CHRNA3-207ENST00000559941 ZAP70P43403 619 aa25.06■■□□□ 1.6
CHRNA3-207ENST00000559941 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.06■■□□□ 1.6
CHRNA3-207ENST00000559941 DOCK1Q14185 1865 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 CDK5RAP2Q96SN8 1893 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 COL2A1P02458 1487 aaPredicted RBP25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 SOX10P56693 466 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 HSP90AB4PQ58FF6 505 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 NAA16Q6N069 864 aaPredicted RBP25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 RPAP2Q8IXW5 612 aaPredicted RBP25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 SCYL3Q8IZE3 742 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 ZBTB40Q9NUA8 1239 aa25.05■■□□□ 1.6
CHRNA3-207ENST00000559941 TBC1D12O60347 775 aa25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 SLURP2P0DP57 97 aa25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 TEX11Q8IYF3 940 aa25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 NOL10Q9BSC4 688 aaKnown RBP25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 OSBPL5Q9H0X9 879 aaPredicted RBP25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 EFCC1Q9HA90 598 aa25.04■■□□□ 1.6
CHRNA3-207ENST00000559941 FOCADQ5VW36 1801 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 PHIPQ8WWQ0 1821 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 CXCL11O14625 94 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 TLR2O60603 784 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 PPP4CP60510 307 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 ANKRD23Q86SG2 305 aa25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 PIH1D3Q9NQM4 214 aaKnown RBP25.03■■□□□ 1.6
CHRNA3-207ENST00000559941 PTPRFP10586 1907 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 CTNND1O60716 968 aaKnown RBP25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 BAG3O95817 575 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 CAP1Q01518 475 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 MOGSQ13724 837 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 SH3RF3Q8TEJ3 882 aaPredicted RBP25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 CHMP4BQ9H444 224 aaKnown RBP25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 PICK1Q9NRD5 415 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 AATFQ9NY61 560 aaKnown RBP eCLIP25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 PTPN22Q9Y2R2 807 aa25.02■■□□□ 1.6
CHRNA3-207ENST00000559941 PLCG2P16885 1265 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 PTPRAP18433 802 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 AACSQ86V21 672 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 SIRT2Q8IXJ6 389 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 RHPN1Q8TCX5 695 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 ZHX2Q9Y6X8 837 aa25.01■■□□□ 1.59
CHRNA3-207ENST00000559941 HMMRO75330 724 aa25■■□□□ 1.59
CHRNA3-207ENST00000559941 ARHGEF6Q15052 776 aa25■■□□□ 1.59
CHRNA3-207ENST00000559941 ADGRA1Q86SQ6 560 aa25■■□□□ 1.59
CHRNA3-207ENST00000559941 ATAD5Q96QE3 1844 aa25■■□□□ 1.59
CHRNA3-207ENST00000559941 PDHXO00330 501 aa24.99■■□□□ 1.59
CHRNA3-207ENST00000559941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.99■■□□□ 1.59
CHRNA3-207ENST00000559941 IL1RAPL2Q9NP60 686 aa24.99■■□□□ 1.59
CHRNA3-207ENST00000559941 AFG3L2Q9Y4W6 797 aa24.99■■□□□ 1.59
CHRNA3-207ENST00000559941 SIPA1L1O43166 1804 aa24.98■■□□□ 1.59
CHRNA3-207ENST00000559941 PDE3AQ14432 1141 aa24.98■■□□□ 1.59
CHRNA3-207ENST00000559941 C17orf99Q6UX52 265 aa24.98■■□□□ 1.59
CHRNA3-207ENST00000559941 KIF1BPQ96EK5 621 aa24.98■■□□□ 1.59
CHRNA3-207ENST00000559941 HTTP42858 3142 aa24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 A0A0G2JLL6 359 aaPredicted RBP24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 FAM196BA6NMK8 535 aa24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 GPAT2Q6NUI2 795 aa24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 PRRT2Q7Z6L0 340 aaPredicted RBP24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 ZSWIM8A7E2V4 1837 aa24.97■■□□□ 1.59
CHRNA3-207ENST00000559941 IDH1O75874 414 aaKnown RBP24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 CYP7A1P22680 504 aa24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 FASTKD5Q7L8L6 764 aaKnown RBP24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 CLASRPQ8N2M8 674 aaKnown RBP24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 DHX36Q9H2U1 1008 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms