RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 INHBEP58166 350 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 OTUD7BQ6GQQ9 843 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 ZFPM1Q8IX07 1006 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 DNAJC2Q99543 621 aaKnown RBP9.99□□□□□ -0.81
SNX1-207ENST00000559401 IDI2Q9BXS1 227 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 DDX4Q9NQI0 724 aaKnown RBP9.99□□□□□ -0.81
SNX1-207ENST00000559401 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
SNX1-207ENST00000559401 AATFQ9NY61 560 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNX1-207ENST00000559401 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 RFX7Q2KHR2 1363 aa9.99□□□□□ -0.81
SNX1-207ENST00000559401 DOCK1Q14185 1865 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 SPDYE5A6NIY4 337 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 ALDH1A1P00352 501 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 PLCG2P16885 1265 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 CYP7A1P22680 504 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 INPP5BP32019 993 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 RHBDL3P58872 404 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 DGKZQ13574 1117 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 IFNL1Q8IU54 200 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 SH3RF3Q8TEJ3 882 aaPredicted RBP9.98□□□□□ -0.81
SNX1-207ENST00000559401 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 SNCAIPQ9Y6H5 919 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 FOCADQ5VW36 1801 aa9.98□□□□□ -0.81
SNX1-207ENST00000559401 CCL15-CCL14A0A0B4J2E2 113 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
SNX1-207ENST00000559401 IGF2BP3O00425 579 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNX1-207ENST00000559401 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
SNX1-207ENST00000559401 MAP4K4O95819 1239 aaPredicted RBP9.97□□□□□ -0.81
SNX1-207ENST00000559401 GTF2A2P52657 109 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 CCL15Q16663 113 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 ADGRA1Q86SQ6 560 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 ERO1BQ86YB8 467 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 MAPKAPK5Q8IW41 473 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 MAGEB6Q8N7X4 407 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 ANTXR1Q9H6X2 564 aa9.97□□□□□ -0.81
SNX1-207ENST00000559401 ATAD5Q96QE3 1844 aa9.96□□□□□ -0.81
SNX1-207ENST00000559401 FAM196BA6NMK8 535 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 GPR25O00155 361 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 GOLIM4O00461 696 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 TTF1Q15361 905 aaPredicted RBP9.96□□□□□ -0.82
SNX1-207ENST00000559401 MIGA1Q8NAN2 632 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 TGFBRAP1Q8WUH2 860 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
SNX1-207ENST00000559401 ABHD8Q96I13 439 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 TRIM34Q9BYJ4 488 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 MCOLN1Q9GZU1 580 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 OSBPL5Q9H0X9 879 aaPredicted RBP9.96□□□□□ -0.82
SNX1-207ENST00000559401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNX1-207ENST00000559401 PICK1Q9NRD5 415 aa9.96□□□□□ -0.82
SNX1-207ENST00000559401 MYH1P12882 1939 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 MYH7P12883 1935 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 IRF6O14896 467 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 IGSF3O75054 1194 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 FKTNO75072 461 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 SLURP2P0DP57 97 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 CETPP11597 493 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 USP5P45974 858 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 DYNLL1P63167 89 aaKnown RBP9.95□□□□□ -0.82
SNX1-207ENST00000559401 PPATQ06203 517 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 PPIL2Q13356 520 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 SNAPC2Q13487 334 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 TAF1CQ15572 869 aaPredicted RBP9.95□□□□□ -0.82
SNX1-207ENST00000559401 SCYL3Q8IZE3 742 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 BOLA2Q9H3K6 86 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 R3HDMLQ9H3Y0 253 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 SAP30BPQ9UHR5 308 aaKnown RBP9.95□□□□□ -0.82
SNX1-207ENST00000559401 ZNF112Q9UJU3 913 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 ATRNL1Q5VV63 1379 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 COL2A1P02458 1487 aaPredicted RBP9.95□□□□□ -0.82
SNX1-207ENST00000559401 NAV1Q8NEY1 1877 aa9.95□□□□□ -0.82
SNX1-207ENST00000559401 SIPA1L1O43166 1804 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 FLT1P17948 1338 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 CCDC85CA6NKD9 419 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 PPP4CP60510 307 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 CRHR2Q13324 411 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 SLC4A8Q2Y0W8 1093 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 NOL9Q5SY16 702 aaKnown RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 SLC9C2Q5TAH2 1124 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 CTU1Q7Z7A3 348 aaKnown RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 CRACR2BQ8N4Y2 399 aaPredicted RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX1-207ENST00000559401 EDC3Q96F86 508 aaKnown RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 PTPN18Q99952 460 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 PAG1Q9NWQ8 432 aa9.94□□□□□ -0.82
SNX1-207ENST00000559401 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
SNX1-207ENST00000559401 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
SNX1-207ENST00000559401 CTNND1O60716 968 aaKnown RBP9.93□□□□□ -0.82
SNX1-207ENST00000559401 HLA-DOAP06340 250 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 PDE6AP16499 860 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 ATP5JP18859 108 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 CERS3Q8IU89 383 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
SNX1-207ENST00000559401 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms