RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 PAWRQ96IZ0 340 aaKnown RBP9.48□□□□□ -0.89
HMG20A-207ENST00000559035 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
HMG20A-207ENST00000559035 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMG20A-207ENST00000559035 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
HMG20A-207ENST00000559035 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
HMG20A-207ENST00000559035 ALDH1L1O75891 902 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 BCAMP50895 628 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
HMG20A-207ENST00000559035 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 CDC42EP5Q6NZY7 148 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 NECAB2Q7Z6G3 386 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 SCYL3Q8IZE3 742 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 AFG3L2Q9Y4W6 797 aa9.47□□□□□ -0.89
HMG20A-207ENST00000559035 TNPO2O14787 897 aaKnown RBP9.46□□□□□ -0.9
HMG20A-207ENST00000559035 PDE8BO95263 885 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 PTPRAP18433 802 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 MAGEA10P43363 369 aaPredicted RBP9.46□□□□□ -0.9
HMG20A-207ENST00000559035 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 FAM110CQ1W6H9 321 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 TDHQ8IZJ6 230 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 ZMYND8Q9ULU4 1186 aaPredicted RBP9.46□□□□□ -0.9
HMG20A-207ENST00000559035 FRMPD3Q5JV73 1810 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 PFASO15067 1338 aa9.46□□□□□ -0.9
HMG20A-207ENST00000559035 ZBTB22O15209 634 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 TFRCP02786 760 aaKnown RBP9.45□□□□□ -0.9
HMG20A-207ENST00000559035 NBPF7P0C2Y1 421 aaPredicted RBP9.45□□□□□ -0.9
HMG20A-207ENST00000559035 PRDX5P30044 214 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 SH3BP5LQ7L8J4 393 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 FASTKD5Q7L8L6 764 aaKnown RBP9.45□□□□□ -0.9
HMG20A-207ENST00000559035 VPS37DQ86XT2 251 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 ZFPM1Q8IX07 1006 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
HMG20A-207ENST00000559035 AGTPBP1Q9UPW5 1226 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 SALL1Q9NSC2 1324 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
HMG20A-207ENST00000559035 HMGCRP04035 888 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 COL6A1P12109 1028 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 TCP10Q12799 353 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 PUM3Q15397 648 aaKnown RBP9.44□□□□□ -0.9
HMG20A-207ENST00000559035 METTL24Q5JXM2 366 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 MAP3K21Q5TCX8 1036 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.44□□□□□ -0.9
HMG20A-207ENST00000559035 GUCD1Q96NT3 240 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 OGDHLQ9ULD0 1010 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 GAKO14976 1311 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 ATAD5Q96QE3 1844 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 AK9Q5TCS8 1911 aa9.44□□□□□ -0.9
HMG20A-207ENST00000559035 SIPA1L1O43166 1804 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 RPTORQ8N122 1335 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 FRAT2O75474 233 aaPredicted RBP9.43□□□□□ -0.9
HMG20A-207ENST00000559035 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 SYN1P17600 705 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 EXOSC9Q06265 439 aaKnown RBP9.43□□□□□ -0.9
HMG20A-207ENST00000559035 TRIM32Q13049 653 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 TREML2Q5T2D2 321 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 GADL1Q6ZQY3 521 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 KLHDC4Q8TBB5 520 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 TRIB2Q92519 343 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 SRCIN1Q9C0H9 1055 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
HMG20A-207ENST00000559035 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.43□□□□□ -0.9
HMG20A-207ENST00000559035 GJD2Q9UKL4 321 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 ZHX2Q9Y6X8 837 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 MYH2Q9UKX2 1941 aa9.43□□□□□ -0.9
HMG20A-207ENST00000559035 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 ENTPD3O75355 529 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 RGS3P49796 1198 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 FAM109BQ6ICB4 259 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 CCDC84Q86UT8 332 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 ANKRD13CQ8N6S4 541 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 SMCR8Q8TEV9 937 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 COA7Q96BR5 231 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 C11orf49Q9H6J7 331 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 DDX4Q9NQI0 724 aaKnown RBP9.42□□□□□ -0.9
HMG20A-207ENST00000559035 PICK1Q9NRD5 415 aa9.42□□□□□ -0.9
HMG20A-207ENST00000559035 DDTLA6NHG4 134 aaPredicted RBP9.41□□□□□ -0.9
HMG20A-207ENST00000559035 TRIM75PA6NK02 468 aa9.41□□□□□ -0.9
HMG20A-207ENST00000559035 CTNND1O60716 968 aaKnown RBP9.41□□□□□ -0.9
HMG20A-207ENST00000559035 IFIT1P09914 478 aaKnown RBP9.41□□□□□ -0.9
HMG20A-207ENST00000559035 LPIN2Q92539 896 aa9.41□□□□□ -0.9
HMG20A-207ENST00000559035 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
HMG20A-207ENST00000559035 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
HMG20A-207ENST00000559035 BDP1A6H8Y1 2624 aa9.4□□□□□ -0.9
HMG20A-207ENST00000559035 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
HMG20A-207ENST00000559035 WDR63Q8IWG1 891 aa9.4□□□□□ -0.9
HMG20A-207ENST00000559035 UBE2OQ9C0C9 1292 aaKnown RBP9.4□□□□□ -0.9
HMG20A-207ENST00000559035 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
HMG20A-207ENST00000559035 USP40Q9NVE5 1235 aa9.4□□□□□ -0.9
HMG20A-207ENST00000559035 PDS5AQ29RF7 1337 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms