RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 RAB6AP20340 208 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 ERVK-24P63145 666 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 SEMA6CQ9H3T2 930 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 VTI1BQ9UEU0 232 aa6.5□□□□□ -1.37
VPS13C-207ENST00000558919 NFICP08651 508 aa6.49□□□□□ -1.37
VPS13C-207ENST00000558919 ZDHHC13Q8IUH4 622 aa6.49□□□□□ -1.37
VPS13C-207ENST00000558919 GIMAP7Q8NHV1 300 aa6.49□□□□□ -1.37
VPS13C-207ENST00000558919 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
VPS13C-207ENST00000558919 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
VPS13C-207ENST00000558919 LIG3P49916 1009 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 SEZ6L2Q6UXD5 910 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 AGMOQ6ZNB7 445 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 SHKBP1Q8TBC3 707 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 MFSD14AQ96MC6 490 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 PCDHA4Q9UN74 947 aa6.48□□□□□ -1.37
VPS13C-207ENST00000558919 ZNF16P17020 682 aaPredicted RBP6.47□□□□□ -1.37
VPS13C-207ENST00000558919 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
VPS13C-207ENST00000558919 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS13C-207ENST00000558919 ZAR1Q86SH2 424 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 SMYD4Q8IYR2 804 aaPredicted RBP6.47□□□□□ -1.37
VPS13C-207ENST00000558919 Q8N3U1 123 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 GAL3ST3Q96A11 431 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
VPS13C-207ENST00000558919 PRR19A6NJB7 356 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 WDR64B1ANS9 1081 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 F13BP05160 661 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 LMNB1P20700 586 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 RING1Q06587 406 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 GATA6Q92908 595 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.38
VPS13C-207ENST00000558919 C1GALT1Q9NS00 363 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
VPS13C-207ENST00000558919 RBM47A0AV96 593 aaKnown RBP6.45□□□□□ -1.38
VPS13C-207ENST00000558919 DCDC2CA8MYV0 355 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 FANCGO15287 622 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 RNGTTO60942 597 aaKnown RBP6.45□□□□□ -1.38
VPS13C-207ENST00000558919 TGFB1P01137 390 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 HCLS1P14317 486 aaPredicted RBP6.45□□□□□ -1.38
VPS13C-207ENST00000558919 ADMP35318 185 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 PTPN11Q06124 597 aaPredicted RBP6.45□□□□□ -1.38
VPS13C-207ENST00000558919 LRP8Q14114 963 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 MAP3K11Q16584 847 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 FBXL6Q8N531 539 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 ELMO3Q96BJ8 720 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 PCDHB5Q9Y5E4 795 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 SNCAIPQ9Y6H5 919 aa6.45□□□□□ -1.38
VPS13C-207ENST00000558919 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-207ENST00000558919 COBLO75128 1261 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 NEFMP07197 916 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 TFE3P19532 575 aaPredicted RBP6.44□□□□□ -1.38
VPS13C-207ENST00000558919 GRIK1P39086 918 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 CYP27A1Q02318 531 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 PWP1Q13610 501 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 ARTNQ5T4W7 220 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 INTS5Q6P9B9 1019 aaKnown RBP6.44□□□□□ -1.38
VPS13C-207ENST00000558919 LRFN4Q6PJG9 635 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 HDXQ7Z353 690 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 C12orf40Q86WS4 652 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 PHC3Q8NDX5 983 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 ISL2Q96A47 359 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 MIR1-1HGQ9H1L0 117 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 CSADQ9Y600 493 aa6.44□□□□□ -1.38
VPS13C-207ENST00000558919 SCO2A0A1W2PP80 73 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 CD97P48960 835 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 INPP5AQ14642 412 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 ZBTB37Q5TC79 503 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 CYFIP1Q7L576 1253 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 CCDC84Q86UT8 332 aaPredicted RBP6.43□□□□□ -1.38
VPS13C-207ENST00000558919 RELL1Q8IUW5 271 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 KCT2Q8NC54 265 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 PLPPR2Q96GM1 343 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 SSU72Q9NP77 194 aaKnown RBP6.43□□□□□ -1.38
VPS13C-207ENST00000558919 PICK1Q9NRD5 415 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 PIM2Q9P1W9 311 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 TLR6Q9Y2C9 796 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 LEMD3Q9Y2U8 911 aa6.43□□□□□ -1.38
VPS13C-207ENST00000558919 NTF4P34130 210 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 LMNB2Q03252 620 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 SEPT6Q14141 434 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 DIEXFQ68CQ4 756 aaKnown RBP6.42□□□□□ -1.38
VPS13C-207ENST00000558919 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS13C-207ENST00000558919 ZNF507Q8TCN5 953 aa6.42□□□□□ -1.38
VPS13C-207ENST00000558919 LGR6Q9HBX8 967 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms