RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
LINC01220-201ENST00000558575 TESPA1A2RU30 521 aaPredicted RBP18.91■□□□□ 0.62
LINC01220-201ENST00000558575 LDHBP07195 334 aaKnown RBP18.91■□□□□ 0.62
LINC01220-201ENST00000558575 CRKP46108 304 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
LINC01220-201ENST00000558575 DIXDC1Q155Q3 683 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 TSHZ3Q63HK5 1081 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 SH3TC2Q8TF17 1288 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 LNPKQ9C0E8 428 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 BOLA2Q9H3K6 86 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 ECHDC1Q9NTX5 307 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
LINC01220-201ENST00000558575 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
LINC01220-201ENST00000558575 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
LINC01220-201ENST00000558575 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
LINC01220-201ENST00000558575 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
LINC01220-201ENST00000558575 APOBEC3HQ6NTF7 200 aaKnown RBP18.9■□□□□ 0.62
LINC01220-201ENST00000558575 NBPF11Q86T75 865 aa18.9■□□□□ 0.62
LINC01220-201ENST00000558575 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
LINC01220-201ENST00000558575 EDC3Q96F86 508 aaKnown RBP18.9■□□□□ 0.62
LINC01220-201ENST00000558575 MECOMQ03112 1051 aa18.89■□□□□ 0.61
LINC01220-201ENST00000558575 HHIPL2Q6UWX4 724 aa18.89■□□□□ 0.61
LINC01220-201ENST00000558575 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
LINC01220-201ENST00000558575 CHD1LQ86WJ1 897 aa18.89■□□□□ 0.61
LINC01220-201ENST00000558575 SOX1O00570 391 aaPredicted RBP18.88■□□□□ 0.61
LINC01220-201ENST00000558575 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC01220-201ENST00000558575 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
LINC01220-201ENST00000558575 PI4K2BQ8TCG2 481 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 DPF3Q92784 378 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 TEKT1Q969V4 418 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
LINC01220-201ENST00000558575 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 HAUS7Q99871 368 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 MGAMO43451 1857 aa18.88■□□□□ 0.61
LINC01220-201ENST00000558575 PPP1R12BO60237 982 aaPredicted RBP18.87■□□□□ 0.61
LINC01220-201ENST00000558575 FAM163AQ96GL9 167 aaPredicted RBP18.87■□□□□ 0.61
LINC01220-201ENST00000558575 RAI14Q9P0K7 980 aa18.87■□□□□ 0.61
LINC01220-201ENST00000558575 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
LINC01220-201ENST00000558575 STAP2Q9UGK3 403 aa18.87■□□□□ 0.61
LINC01220-201ENST00000558575 DAGLAQ9Y4D2 1042 aa18.87■□□□□ 0.61
LINC01220-201ENST00000558575 GAKO14976 1311 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 MAST3O60307 1309 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 UNCXA6NJT0 531 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 USP2O75604 605 aaPredicted RBP18.86■□□□□ 0.61
LINC01220-201ENST00000558575 NEFLP07196 543 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 MX1P20591 662 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 MNX1P50219 401 aaPredicted RBP18.86■□□□□ 0.61
LINC01220-201ENST00000558575 NBPF12Q5TAG4 269 aaPredicted RBP18.86■□□□□ 0.61
LINC01220-201ENST00000558575 MS4A4AQ96JQ5 239 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
LINC01220-201ENST00000558575 ARHGAP39Q9C0H5 1083 aa18.86■□□□□ 0.61
LINC01220-201ENST00000558575 TDRD3Q9H7E2 651 aaKnown RBP18.86■□□□□ 0.61
LINC01220-201ENST00000558575 TTC41PQ6P2S7 1318 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 MYH13Q9UKX3 1938 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 GOLIM4O00461 696 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 PDE4AP27815 886 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 PDE1AP54750 535 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 LRCH3Q96II8 777 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 ZNF70Q9UC06 446 aaPredicted RBP18.85■□□□□ 0.61
LINC01220-201ENST00000558575 PPP2R3BQ9Y5P8 575 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 UNC80Q8N2C7 3258 aa18.85■□□□□ 0.61
LINC01220-201ENST00000558575 MTFR1Q15390 333 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 TAF1CQ15572 869 aaPredicted RBP18.84■□□□□ 0.61
LINC01220-201ENST00000558575 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 UBE2Q1Q7Z7E8 422 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 ADGRA1Q86SQ6 560 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 DZIP1Q86YF9 867 aaKnown RBP18.84■□□□□ 0.61
LINC01220-201ENST00000558575 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 BRI3BPQ8WY22 251 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 PAG1Q9NWQ8 432 aa18.84■□□□□ 0.61
LINC01220-201ENST00000558575 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
LINC01220-201ENST00000558575 IDH1O75874 414 aaKnown RBP18.83■□□□□ 0.6
LINC01220-201ENST00000558575 IREB2P48200 963 aaKnown RBP18.83■□□□□ 0.6
LINC01220-201ENST00000558575 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
LINC01220-201ENST00000558575 ANKRD13AQ8IZ07 590 aa18.83■□□□□ 0.6
LINC01220-201ENST00000558575 OPTNQ96CV9 577 aa18.83■□□□□ 0.6
LINC01220-201ENST00000558575 GPATCH3Q96I76 525 aa18.83■□□□□ 0.6
LINC01220-201ENST00000558575 ELP3Q9H9T3 547 aa18.83■□□□□ 0.6
LINC01220-201ENST00000558575 MROH7-TTC4A0A0A0MT08 1334 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 CHGBP05060 677 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 CACNB3P54284 484 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 TTF1Q15361 905 aaPredicted RBP18.82■□□□□ 0.6
LINC01220-201ENST00000558575 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 ZFYVE28Q9HCC9 887 aa18.82■□□□□ 0.6
LINC01220-201ENST00000558575 IGSF3O75054 1194 aa18.81■□□□□ 0.6
LINC01220-201ENST00000558575 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
LINC01220-201ENST00000558575 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
LINC01220-201ENST00000558575 RHBDL3P58872 404 aa18.81■□□□□ 0.6
LINC01220-201ENST00000558575 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
LINC01220-201ENST00000558575 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
LINC01220-201ENST00000558575 NAA16Q6N069 864 aaPredicted RBP18.81■□□□□ 0.6
LINC01220-201ENST00000558575 ERC2O15083 957 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 LDHCP07864 332 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 BTDP43251 543 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 GSTO1P78417 241 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms