RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
VPS18-202ENST00000558474 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
VPS18-202ENST00000558474 COL2A1P02458 1487 aaPredicted RBP17.68■□□□□ 0.42
VPS18-202ENST00000558474 FLT1P17948 1338 aa17.68■□□□□ 0.42
VPS18-202ENST00000558474 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 SLC3A2P08195 630 aaKnown RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 ANP32AP39687 249 aaKnown RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
VPS18-202ENST00000558474 MICALL2Q8IY33 904 aa17.67■□□□□ 0.42
VPS18-202ENST00000558474 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 RNF41Q9H4P4 317 aaPredicted RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
VPS18-202ENST00000558474 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
VPS18-202ENST00000558474 ENTPD3O75355 529 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 PPARAQ07869 468 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 L3MBTL3Q96JM7 780 aaPredicted RBP17.66■□□□□ 0.42
VPS18-202ENST00000558474 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
VPS18-202ENST00000558474 CNNM2Q9H8M5 875 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 ZSWIM6Q9HCJ5 1215 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
VPS18-202ENST00000558474 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 USP17L21D6R901 530 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 E7EWF7 191 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 FGRP09769 529 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 TRDNQ13061 729 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 SPDYE2Q495Y8 402 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 OSBPL5Q9H0X9 879 aaPredicted RBP17.65■□□□□ 0.42
VPS18-202ENST00000558474 SCN4AP35499 1836 aa17.65■□□□□ 0.42
VPS18-202ENST00000558474 GLTPD2A6NH11 291 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 WNT10BO00744 389 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 ST18O60284 1047 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 LMOD1P29536 600 aaPredicted RBP17.64■□□□□ 0.41
VPS18-202ENST00000558474 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 MAPKAPK5Q8IW41 473 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 NCOA7Q8NI08 942 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
VPS18-202ENST00000558474 KRT23Q9C075 422 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
VPS18-202ENST00000558474 TDRD3Q9H7E2 651 aaKnown RBP17.64■□□□□ 0.41
VPS18-202ENST00000558474 ZNF287Q9HBT7 754 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 ZNF70Q9UC06 446 aaPredicted RBP17.64■□□□□ 0.41
VPS18-202ENST00000558474 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 WDR19Q8NEZ3 1342 aa17.64■□□□□ 0.41
VPS18-202ENST00000558474 MINDY4BA8MYZ0 360 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 POLR3DP05423 398 aaPredicted RBP17.63■□□□□ 0.41
VPS18-202ENST00000558474 HAND2P61296 217 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 MFSD6Q6ZSS7 791 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 RUFY3Q7L099 469 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 SNX21Q969T3 373 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 MTA3Q9BTC8 594 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
VPS18-202ENST00000558474 WDR90Q96KV7 1748 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 DDNO94850 711 aaPredicted RBP17.62■□□□□ 0.41
VPS18-202ENST00000558474 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
VPS18-202ENST00000558474 TNNI2P48788 182 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 MCM2P49736 904 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 PDE4BQ07343 736 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 KIF4BQ2VIQ3 1234 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
VPS18-202ENST00000558474 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 EHD4Q9H223 541 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 DDX4Q9NQI0 724 aaKnown RBP17.62■□□□□ 0.41
VPS18-202ENST00000558474 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
VPS18-202ENST00000558474 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
VPS18-202ENST00000558474 ORC4O43929 436 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 NEK4P51957 841 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 PICALMQ13492 652 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
VPS18-202ENST00000558474 FAM151AQ8WW52 585 aa17.61■□□□□ 0.41
VPS18-202ENST00000558474 MCM5P33992 734 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 CTDSPL2Q05D32 466 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 NFIAQ12857 509 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 ANKRD1Q15327 319 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 SWAP70Q9UH65 585 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
VPS18-202ENST00000558474 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 IQCA1LA6NCM1 817 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
VPS18-202ENST00000558474 BECN1Q14457 450 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 USP50Q70EL3 339 aaPredicted RBP17.59■□□□□ 0.41
VPS18-202ENST00000558474 SAMD7Q7Z3H4 446 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 METTL16Q86W50 562 aaKnown RBP17.59■□□□□ 0.41
VPS18-202ENST00000558474 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms