RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CCDC70Q6NSX1 233 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 SERTAD1Q9UHV2 236 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 CUTAO60888 179 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 GYG1P46976 350 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 TTLL11Q8NHH1 800 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
AP4E1-202ENST00000558439 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
AP4E1-202ENST00000558439 PDE4BQ07343 736 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 TRERF1Q96PN7 1200 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 PCDHA5Q9Y5H7 936 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 DEXIO95424 95 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 ADD2P35612 726 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 KRT222Q8N1A0 295 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 CRNKL1Q9BZJ0 848 aaKnown RBP17.65■□□□□ 0.42
AP4E1-202ENST00000558439 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 PXDNQ92626 1479 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 CCT6AP40227 531 aaKnown RBP17.65■□□□□ 0.42
AP4E1-202ENST00000558439 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
AP4E1-202ENST00000558439 KIAA1328Q86T90 577 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 BAG1Q99933 345 aaPredicted RBP17.65■□□□□ 0.42
AP4E1-202ENST00000558439 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 TFCP2L1Q9NZI6 479 aa17.65■□□□□ 0.42
AP4E1-202ENST00000558439 ATP1A3P13637 1013 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 KRT2P35908 639 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 SLC39A14Q15043 492 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 DEF6Q9H4E7 631 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 ZNF397Q8NF99 534 aaPredicted RBP17.64■□□□□ 0.41
AP4E1-202ENST00000558439 ZSWIM5Q9P217 1185 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 ANKRD26Q9UPS8 1709 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.41
AP4E1-202ENST00000558439 A0A1W2PQ27 194 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 A0A1W2PQ64 194 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 A0A1W2PQD8 194 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 NOSTRINQ8IVI9 506 aa17.64■□□□□ 0.41
AP4E1-202ENST00000558439 UTYO14607 1347 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 POSTNQ15063 836 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 POLR3EQ9NVU0 708 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 NLRP3Q96P20 1036 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 KCNQ4P56696 695 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
AP4E1-202ENST00000558439 NR5A1Q13285 461 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
AP4E1-202ENST00000558439 ERCC6LQ2NKX8 1250 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 GRAMD1CQ8IYS0 662 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 CARD6Q9BX69 1037 aa17.63■□□□□ 0.41
AP4E1-202ENST00000558439 CTDNEP1O95476 244 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 KIF5BP33176 963 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 HEATR3Q7Z4Q2 680 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 TBC1D10CQ8IV04 446 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 ERO1AQ96HE7 468 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 AATFQ9NY61 560 aaKnown RBP eCLIP17.62■□□□□ 0.41
AP4E1-202ENST00000558439 FAM47AQ5JRC9 791 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 PIK3AP1Q6ZUJ8 805 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 IMPACTQ9P2X3 320 aa17.62■□□□□ 0.41
AP4E1-202ENST00000558439 PUF60Q9UHX1 559 aaKnown RBP17.62■□□□□ 0.41
AP4E1-202ENST00000558439 COBLO75128 1261 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 FAM193AP78312 1265 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 CYB5R4Q7L1T6 521 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 IDEP14735 1019 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 KCNB2Q92953 911 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 NGLY1Q96IV0 654 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 USP27XA6NNY8 438 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
AP4E1-202ENST00000558439 STAT6P42226 847 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 EPS15P42566 896 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 ENOX2Q16206 610 aaKnown RBP17.61■□□□□ 0.41
AP4E1-202ENST00000558439 FANCBQ8NB91 859 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 VPS16Q9H269 839 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 PPARAQ07869 468 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
AP4E1-202ENST00000558439 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
AP4E1-202ENST00000558439 ALDH8A1Q9H2A2 487 aaPredicted RBP17.61■□□□□ 0.41
AP4E1-202ENST00000558439 DENND2AQ9ULE3 1009 aa17.61■□□□□ 0.41
AP4E1-202ENST00000558439 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 USP17L21D6R901 530 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 TRIM47Q96LD4 638 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 DESI2Q9BSY9 194 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 DNA2P51530 1060 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 RBM6P78332 1123 aaKnown RBP17.6■□□□□ 0.41
AP4E1-202ENST00000558439 JAKMIP3Q5VZ66 844 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.41
AP4E1-202ENST00000558439 RASGRF1Q13972 1273 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms