RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 A6NNZ2 444 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 LIG3P49916 1009 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
PCAT29-201ENST00000558411 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 FAM76AQ8TAV0 307 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 COG1Q8WTW3 980 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 KAZALD1Q96I82 304 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
PCAT29-201ENST00000558411 E7EWF7 191 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 INPP5BP32019 993 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 IRAK1P51617 712 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 USP14P54578 494 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 AMPD2Q01433 879 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PDE4BQ07343 736 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PPFIA1Q13136 1202 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
PCAT29-201ENST00000558411 DDX60Q8IY21 1712 aaKnown RBP12.75□□□□□ -0.37
PCAT29-201ENST00000558411 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 TRIML1Q8N9V2 468 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 NFE2L3Q9Y4A8 694 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
PCAT29-201ENST00000558411 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 CCT5P48643 541 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 STIM1Q13586 685 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 NT5DC1Q5TFE4 455 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
PCAT29-201ENST00000558411 PPFIBP1Q86W92 1011 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 CEP120Q8N960 986 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
PCAT29-201ENST00000558411 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 CLIC6Q96NY7 704 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 HAUS7Q99871 368 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 MYO6Q9UM54 1294 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 BMP6P22004 513 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 SATB1Q01826 763 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
PCAT29-201ENST00000558411 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
PCAT29-201ENST00000558411 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
PCAT29-201ENST00000558411 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
PCAT29-201ENST00000558411 KIF28PB7ZC32 967 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 CDC27P30260 824 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 MDM2Q00987 491 aaPredicted RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 PTPAQ15257 358 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 AMOTL1Q8IY63 956 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 EIF3HO15372 352 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 MFAP3LO75121 409 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 PBX1P40424 430 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 TEFQ10587 303 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 B4GALNT4Q76KP1 1039 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 CNGA4Q8IV77 575 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 KBTBD3Q8NAB2 608 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 CRACR2AQ9BSW2 395 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
PCAT29-201ENST00000558411 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
PCAT29-201ENST00000558411 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 FSBPO95073 299 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 TMTC1Q8IUR5 882 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 XAGE2Q96GT9 111 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 CAPS2Q9BXY5 557 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
PCAT29-201ENST00000558411 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 ITIH6Q6UXX5 1313 aa12.72□□□□□ -0.37
PCAT29-201ENST00000558411 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.37
PCAT29-201ENST00000558411 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 GPTP24298 496 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 TDO2P48775 406 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 SARSP49591 514 aaKnown RBP12.71□□□□□ -0.37
PCAT29-201ENST00000558411 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCAT29-201ENST00000558411 RBL2Q08999 1139 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 MORC3Q14149 939 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
PCAT29-201ENST00000558411 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms