RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PNOCQ13519 176 aa5.8□□□□□ -1.48
HMG20A-204ENST00000558288 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
HMG20A-204ENST00000558288 RSRC2Q7L4I2 434 aaKnown RBP5.8□□□□□ -1.48
HMG20A-204ENST00000558288 CPLX3Q8WVH0 158 aa5.8□□□□□ -1.48
HMG20A-204ENST00000558288 RTEL1Q9NZ71 1219 aa5.8□□□□□ -1.48
HMG20A-204ENST00000558288 NWD2Q9ULI1 1742 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 FAM208AQ9UK61 1670 aaKnown RBP5.79□□□□□ -1.48
HMG20A-204ENST00000558288 CPLX1O14810 134 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 KCNQ3O43525 872 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 KIF5CO60282 957 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
HMG20A-204ENST00000558288 RFC4P35249 363 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 FCHSD1Q86WN1 690 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 COL23A1Q86Y22 540 aaPredicted RBP5.79□□□□□ -1.48
HMG20A-204ENST00000558288 TEX2Q8IWB9 1127 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 CNNM3Q8NE01 707 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 ACBD3Q9H3P7 528 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 BRMS1Q9HCU9 246 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 ABCB6Q9NP58 842 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 RNF216Q9NWF9 866 aaPredicted RBP5.79□□□□□ -1.48
HMG20A-204ENST00000558288 FLT4P35916 1363 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 CARMIL3Q8ND23 1372 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 NRKQ7Z2Y5 1582 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 IKBKBO14920 756 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 TSGA10IPQ3SY00 556 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 MCMDC2Q4G0Z9 681 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 C1orf141Q5JVX7 400 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 BICDL1Q6ZP65 573 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 STOX1Q6ZVD7 989 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 SRGAP1Q7Z6B7 1085 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 GJB4Q9NTQ9 266 aa5.79□□□□□ -1.48
HMG20A-204ENST00000558288 POTEB2H3BUK9 544 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 CCDC175P0C221 793 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 SLC27A3Q5K4L6 730 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 ZNF569Q5MCW4 686 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 STK11IPQ8N1F8 1099 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 CEP112Q8N8E3 955 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 SLC16A10Q8TF71 515 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 SECISBP2LQ93073 1101 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 PNKPQ96T60 521 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 FAM204AQ9H8W3 233 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 MKRN1Q9UHC7 482 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 BTBD11A6QL63 1104 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 GRM8O00222 908 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 MAP2K7O14733 419 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 CUTAO60888 179 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 PDIA3P30101 505 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 CABP4P57796 275 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 AKAP17AQ02040 695 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 MTF1Q14872 753 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 BEND6Q5SZJ8 279 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 ANO1Q5XXA6 986 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 IQUBQ8NA54 791 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 NCAPGQ9BPX3 1015 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 AKAP2Q9Y2D5 859 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 IGSF1Q8N6C5 1336 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 RGPD1P0DJD0 1748 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 SOWAHDA6NJG2 315 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 STX10O60499 249 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 YEATS4O95619 227 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 ATP2B1P20020 1258 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 EIF4A1P60842 406 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 CASP8Q14790 479 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 MYSM1Q5VVJ2 828 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 USPL1Q5W0Q7 1092 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 TRMT44Q8IYL2 757 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 KIFC2Q96AC6 838 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 RABEP2Q9H5N1 569 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 MRPL44Q9H9J2 332 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 LGR6Q9HBX8 967 aa5.78□□□□□ -1.48
HMG20A-204ENST00000558288 DBF4Q9UBU7 674 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.78□□□□□ -1.48
HMG20A-204ENST00000558288 COL15A1P39059 1388 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 MMP10P09238 476 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 MNAT1P51948 309 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PROSER3Q2NL68 480 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 SPECC1LQ69YQ0 1117 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 ZNF530Q6P9A1 599 aaPredicted RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 LRRC31Q6UY01 552 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 FAM71BQ8TC56 605 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 SMARCC1Q92922 1105 aaPredicted RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 GBP3Q9H0R5 595 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 ANKZF1Q9H8Y5 726 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 GPHNQ9NQX3 736 aaPredicted RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 SNRKQ9NRH2 765 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 RTCBQ9Y3I0 505 aaKnown RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PNPLA7Q6ZV29 1317 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 A0A0G2JLW4 131 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CTAGE15A4D2H0 777 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CTAGE9A4FU28 777 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 GOLGA8BA8MQT2 603 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CTAGE8P0CG41 777 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CMA1P23946 247 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CORO7P57737 925 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 HAND2P61296 217 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 VSNL1P62760 191 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 DNAJC21Q5F1R6 531 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms