RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 PICALMQ13492 652 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 SUPT20HL1Q3ZLR7 823 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 SEC62Q99442 399 aaKnown RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 SLC4A4Q9Y6R1 1079 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 COL2A1P02458 1487 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-204ENST00000558172 RAD50Q92878 1312 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
LRRC28-204ENST00000558172 MYH8P13535 1937 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
LRRC28-204ENST00000558172 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 CDC45O75419 566 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 NF2P35240 595 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 TCP10Q12799 353 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 MAPKAPK5Q8IW41 473 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
LRRC28-204ENST00000558172 FLT1P17948 1338 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
LRRC28-204ENST00000558172 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-204ENST00000558172 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-204ENST00000558172 MKRN1Q9UHC7 482 aaKnown RBP12.54□□□□□ -0.4
LRRC28-204ENST00000558172 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
LRRC28-204ENST00000558172 PASKQ96RG2 1323 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
LRRC28-204ENST00000558172 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 PRKAB2O43741 272 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 APPP05067 770 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
LRRC28-204ENST00000558172 CCDC129Q6ZRS4 1044 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
LRRC28-204ENST00000558172 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 IFNL3Q8IZI9 196 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 PI4KBQ9UBF8 816 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
LRRC28-204ENST00000558172 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
LRRC28-204ENST00000558172 LAMB1P07942 1786 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 DDTLA6NHG4 134 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-204ENST00000558172 TRAF5O00463 557 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 SGSM2O43147 1006 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-204ENST00000558172 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-204ENST00000558172 FKBP1BP68106 108 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 ALX1Q15699 326 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 DCAF15Q66K64 600 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 SH3BP5LQ7L8J4 393 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF589Q86UQ0 364 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-204ENST00000558172 CSRNP1Q96S65 589 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
LRRC28-204ENST00000558172 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-204ENST00000558172 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 TBC1D12O60347 775 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
LRRC28-204ENST00000558172 HSPD1P10809 573 aaKnown RBP12.51□□□□□ -0.41
LRRC28-204ENST00000558172 TDO2P48775 406 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 PRAMEF18Q5VWM3 479 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 NAPBQ9H115 298 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 HERC5Q9UII4 1024 aaKnown RBP12.51□□□□□ -0.41
LRRC28-204ENST00000558172 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
LRRC28-204ENST00000558172 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 USP17L21D6R901 530 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 CELF2O95319 508 aaKnown RBP12.5□□□□□ -0.41
LRRC28-204ENST00000558172 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
LRRC28-204ENST00000558172 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 EHD4Q9H223 541 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 SAP30BPQ9UHR5 308 aaKnown RBP12.5□□□□□ -0.41
LRRC28-204ENST00000558172 PAPPA2Q9BXP8 1791 aa12.5□□□□□ -0.41
LRRC28-204ENST00000558172 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 UNCXA6NJT0 531 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 FGAP02671 866 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 IREB2P48200 963 aaKnown RBP12.49□□□□□ -0.41
LRRC28-204ENST00000558172 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 CST9Q5W186 159 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms