RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 MYH8P13535 1937 aa20.2■□□□□ 0.82
PBX4-202ENST00000557978 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 PRKG1Q13976 671 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 TICAM2Q86XR7 235 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 ZSCAN29Q8IWY8 852 aaPredicted RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 TGFBRAP1Q8WUH2 860 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 COL2A1P02458 1487 aaPredicted RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 SSC5DA1L4H1 1573 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 MAP3K11Q16584 847 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 DCAF15Q66K64 600 aa20.19■□□□□ 0.82
PBX4-202ENST00000557978 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
PBX4-202ENST00000557978 PDE4AP27815 886 aa20.18■□□□□ 0.82
PBX4-202ENST00000557978 USP5P45974 858 aa20.18■□□□□ 0.82
PBX4-202ENST00000557978 CDAN1Q8IWY9 1227 aa20.18■□□□□ 0.82
PBX4-202ENST00000557978 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
PBX4-202ENST00000557978 CSRNP1Q96S65 589 aa20.18■□□□□ 0.82
PBX4-202ENST00000557978 CRNKL1Q9BZJ0 848 aaKnown RBP20.18■□□□□ 0.82
PBX4-202ENST00000557978 DHX36Q9H2U1 1008 aaKnown RBP20.18■□□□□ 0.82
PBX4-202ENST00000557978 MKRN1Q9UHC7 482 aaKnown RBP20.18■□□□□ 0.82
PBX4-202ENST00000557978 ATRNL1Q5VV63 1379 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 ECE1P42892 770 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
PBX4-202ENST00000557978 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 ZFPM1Q8IX07 1006 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 APPBP2Q92624 585 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 PCNTO95613 3336 aa20.17■□□□□ 0.82
PBX4-202ENST00000557978 UBE2Q2LH0YL09 131 aa20.16■□□□□ 0.82
PBX4-202ENST00000557978 USP2O75604 605 aaPredicted RBP20.16■□□□□ 0.82
PBX4-202ENST00000557978 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
PBX4-202ENST00000557978 MOB2Q70IA6 237 aa20.16■□□□□ 0.82
PBX4-202ENST00000557978 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
PBX4-202ENST00000557978 FLT1P17948 1338 aa20.16■□□□□ 0.82
PBX4-202ENST00000557978 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 ATAD5Q96QE3 1844 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 DDTLA6NHG4 134 aaPredicted RBP20.15■□□□□ 0.82
PBX4-202ENST00000557978 MBD4O95243 580 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 SLFNL1Q499Z3 407 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 LCORLQ8N3X6 602 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 DNAJC5GQ8N7S2 189 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 KLRG1Q96E93 195 aa20.15■□□□□ 0.82
PBX4-202ENST00000557978 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
PBX4-202ENST00000557978 CHGBP05060 677 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 ZNF157P51786 506 aaPredicted RBP20.14■□□□□ 0.81
PBX4-202ENST00000557978 LDLRAD1Q5T700 205 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 SH3BP5LQ7L8J4 393 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 ANKRD13AQ8IZ07 590 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 CCDC102AQ96A19 550 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 ZNF341Q9BYN7 854 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 ARMT1Q9H993 441 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 PI4KBQ9UBF8 816 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 FZD1Q9UP38 647 aa20.14■□□□□ 0.81
PBX4-202ENST00000557978 DDX60LQ5H9U9 1706 aaKnown RBP20.14■□□□□ 0.81
PBX4-202ENST00000557978 CYP4F22Q6NT55 531 aa20.13■□□□□ 0.81
PBX4-202ENST00000557978 MIGA2Q7L4E1 593 aa20.13■□□□□ 0.81
PBX4-202ENST00000557978 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
PBX4-202ENST00000557978 LAMB1P07942 1786 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 HLA-DOAP06340 250 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 TTC22Q5TAA0 569 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 CAPNS2Q96L46 248 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
PBX4-202ENST00000557978 DOCK1Q14185 1865 aa20.12■□□□□ 0.81
PBX4-202ENST00000557978 TBC1D12O60347 775 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 GNAT2P19087 354 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 VEGFBP49765 207 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 MAP3K9P80192 1104 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 ZMYM1Q5SVZ6 1142 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 TTC6Q86TZ1 520 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.11■□□□□ 0.81
PBX4-202ENST00000557978 CSADQ9Y600 493 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 SLC4A4Q9Y6R1 1079 aa20.11■□□□□ 0.81
PBX4-202ENST00000557978 HIP1O00291 1037 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 GRM1Q13255 1194 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 FOXP4Q8IVH2 680 aaPredicted RBP20.1■□□□□ 0.81
PBX4-202ENST00000557978 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 SLC10A4Q96EP9 437 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 STRBPQ96SI9 672 aaKnown RBP20.1■□□□□ 0.81
PBX4-202ENST00000557978 DCP1AQ9NPI6 582 aaPredicted RBP20.1■□□□□ 0.81
PBX4-202ENST00000557978 HELLSQ9NRZ9 838 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 HERC5Q9UII4 1024 aaKnown RBP20.1■□□□□ 0.81
PBX4-202ENST00000557978 PALD1Q9ULE6 856 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 GPAA1O43292 621 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 TRIM34Q9BYJ4 488 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.1■□□□□ 0.81
PBX4-202ENST00000557978 SAP30BPQ9UHR5 308 aaKnown RBP20.1■□□□□ 0.81
PBX4-202ENST00000557978 ZNF112Q9UJU3 913 aa20.1■□□□□ 0.81
PBX4-202ENST00000557978 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
PBX4-202ENST00000557978 SLC10A3P09131 477 aa20.09■□□□□ 0.81
PBX4-202ENST00000557978 NOGQ13253 232 aa20.09■□□□□ 0.81
PBX4-202ENST00000557978 AMOTL1Q8IY63 956 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms