RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 A0A1B0GVL5 298 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 IKBKBO14920 756 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 NRDCO43847 1150 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 SLC3A2P08195 630 aaKnown RBP15.28■□□□□ 0.04
CPNE6-204ENST00000557829 SYNE3Q6ZMZ3 975 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 APPBP2Q92624 585 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
CPNE6-204ENST00000557829 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
CPNE6-204ENST00000557829 LRP5O75197 1615 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 PRC1O43663 620 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 MYO1BO43795 1136 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 ITGA6P23229 1130 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 GABPB1Q06547 395 aaPredicted RBP15.27■□□□□ 0.04
CPNE6-204ENST00000557829 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
CPNE6-204ENST00000557829 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
CPNE6-204ENST00000557829 HPS5Q9UPZ3 1129 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 NEDD4P46934 1319 aa15.27■□□□□ 0.04
CPNE6-204ENST00000557829 GYS1P13807 737 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 NFIXQ14938 502 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 R3HDM1Q15032 1099 aaKnown RBP15.26■□□□□ 0.03
CPNE6-204ENST00000557829 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 ANO1Q5XXA6 986 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 CHST3Q7LGC8 479 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 RIC1Q4ADV7 1423 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 FOXP2O15409 715 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 CCP110O43303 1012 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 ZNF202O95125 648 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 SLU7O95391 586 aaKnown RBP15.26■□□□□ 0.03
CPNE6-204ENST00000557829 FGAP02671 866 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 AXDND1Q5T1B0 1012 aaPredicted RBP15.26■□□□□ 0.03
CPNE6-204ENST00000557829 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
CPNE6-204ENST00000557829 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 DPCR1Q3MIW9 517 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-204ENST00000557829 L2HGDHQ9H9P8 463 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 GOLGA8BA8MQT2 603 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 CPLX1O14810 134 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 PPP6R2O75170 966 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-204ENST00000557829 SLC39A14Q15043 492 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 RALYLQ86SE5 291 aaKnown RBP15.25■□□□□ 0.03
CPNE6-204ENST00000557829 CREBRFQ8IUR6 639 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
CPNE6-204ENST00000557829 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
CPNE6-204ENST00000557829 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-204ENST00000557829 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 ZNF213O14771 459 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 CDKL5O76039 1030 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPNE6-204ENST00000557829 NCAPHQ15003 741 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 GORABQ5T7V8 394 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 FAM53CQ9NYF3 392 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 TUBE1Q9UJT0 475 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 ARAP2Q8WZ64 1704 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 SFPQP23246 707 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPNE6-204ENST00000557829 ANTXR2P58335 489 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 E4F1Q66K89 784 aaPredicted RBP15.24■□□□□ 0.03
CPNE6-204ENST00000557829 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
CPNE6-204ENST00000557829 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
CPNE6-204ENST00000557829 IFNKQ9P0W0 207 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 TAF1P21675 1872 aa15.24■□□□□ 0.03
CPNE6-204ENST00000557829 AKAP11Q9UKA4 1901 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 A0A1B0GUL6 1792 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 ZMYM6O95789 1325 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 CBFA2T2O43439 604 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 POLR3DP05423 398 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 ELOA2Q8IYF1 753 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 NYXQ9GZU5 481 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 GPHNQ9NQX3 736 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
CPNE6-204ENST00000557829 HPSEQ9Y251 543 aa15.23■□□□□ 0.03
CPNE6-204ENST00000557829 SMC2O95347 1197 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 PFKFB1P16118 471 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 SLC10A5Q5PT55 438 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 A0A087WWV3 80 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 NAA30Q147X3 362 aaPredicted RBP15.22■□□□□ 0.03
CPNE6-204ENST00000557829 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 TPTE2Q6XPS3 522 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 PPP1R13BQ96KQ4 1090 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms