RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
APEX1-220ENST00000557592 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
APEX1-220ENST00000557592 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
APEX1-220ENST00000557592 FLT1P17948 1338 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 NAV1Q8NEY1 1877 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
APEX1-220ENST00000557592 A0A0D9SFI3 127 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 GPAA1O43292 621 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 NF2P35240 595 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 C1QTNF8P60827 252 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 SUPT20HL1Q3ZLR7 823 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 BMP2KLQ5H9B9 411 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
APEX1-220ENST00000557592 TEPSINQ96N21 525 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
APEX1-220ENST00000557592 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
APEX1-220ENST00000557592 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 MYH1P12882 1939 aa13.64□□□□□ -0.23
APEX1-220ENST00000557592 PRKAB2O43741 272 aa13.63□□□□□ -0.23
APEX1-220ENST00000557592 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
APEX1-220ENST00000557592 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
APEX1-220ENST00000557592 CCDC129Q6ZRS4 1044 aa13.63□□□□□ -0.23
APEX1-220ENST00000557592 SDR42E1Q8WUS8 393 aa13.63□□□□□ -0.23
APEX1-220ENST00000557592 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
APEX1-220ENST00000557592 SLC4A4Q9Y6R1 1079 aa13.63□□□□□ -0.23
APEX1-220ENST00000557592 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
APEX1-220ENST00000557592 GNAT2P19087 354 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 PRKG1Q13976 671 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
APEX1-220ENST00000557592 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 CST9Q5W186 159 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 SH3BP5LQ7L8J4 393 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
APEX1-220ENST00000557592 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
APEX1-220ENST00000557592 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
APEX1-220ENST00000557592 TMEM88BA6NKF7 163 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 APPP05067 770 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 CHMLP26374 656 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 APLP1P51693 650 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 GBA2Q9HCG7 927 aaPredicted RBP13.61□□□□□ -0.23
APEX1-220ENST00000557592 DCP1AQ9NPI6 582 aaPredicted RBP13.61□□□□□ -0.23
APEX1-220ENST00000557592 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
APEX1-220ENST00000557592 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
APEX1-220ENST00000557592 PAPPA2Q9BXP8 1791 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 ATRNL1Q5VV63 1379 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 POLR3DP05423 398 aaPredicted RBP13.6□□□□□ -0.23
APEX1-220ENST00000557592 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
APEX1-220ENST00000557592 MOB2Q70IA6 237 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
APEX1-220ENST00000557592 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 DHX36Q9H2U1 1008 aaKnown RBP13.6□□□□□ -0.23
APEX1-220ENST00000557592 MCM9Q9NXL9 1143 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
APEX1-220ENST00000557592 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
APEX1-220ENST00000557592 GSG1L2A8MUP6 293 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
APEX1-220ENST00000557592 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
APEX1-220ENST00000557592 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 TDO2P48775 406 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 DCAF15Q66K64 600 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
APEX1-220ENST00000557592 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
APEX1-220ENST00000557592 ANGEL1Q9UNK9 670 aaKnown RBP13.59□□□□□ -0.23
APEX1-220ENST00000557592 SIPA1L1O43166 1804 aa13.59□□□□□ -0.23
APEX1-220ENST00000557592 CDC45O75419 566 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 HSPA6P17066 643 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 FKBP1BP68106 108 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 ARMC9Q7Z3E5 817 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
APEX1-220ENST00000557592 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 IL25Q9H293 177 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
APEX1-220ENST00000557592 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 PI4KBQ9UBF8 816 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 RAD50Q92878 1312 aa13.58□□□□□ -0.24
APEX1-220ENST00000557592 FAM196BA6NMK8 535 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 USP17L21D6R901 530 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 USP2O75604 605 aaPredicted RBP13.57□□□□□ -0.24
APEX1-220ENST00000557592 SLURP2P0DP57 97 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 CYP2D6P10635 497 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 IREB2P48200 963 aaKnown RBP13.57□□□□□ -0.24
APEX1-220ENST00000557592 HUNKP57058 714 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 GIMAP6Q6P9H5 292 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
APEX1-220ENST00000557592 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8347.5 ms