RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RFX5P48382 616 aaPredicted RBP22.96■■□□□ 1.27
ABCD4-228ENST00000557588 PAK6Q9NQU5 681 aaPredicted RBP22.96■■□□□ 1.27
ABCD4-228ENST00000557588 EVI5O60447 810 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 PTPRCP08575 1304 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 ELNP15502 786 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 PTPRAP18433 802 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 ZFPM1Q8IX07 1006 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 PICK1Q9NRD5 415 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 USP40Q9NVE5 1235 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 ZHX2Q9Y6X8 837 aa22.95■■□□□ 1.26
ABCD4-228ENST00000557588 SOX1O00570 391 aaPredicted RBP22.94■■□□□ 1.26
ABCD4-228ENST00000557588 LDHBP07195 334 aaKnown RBP22.94■■□□□ 1.26
ABCD4-228ENST00000557588 IDI2Q9BXS1 227 aa22.94■■□□□ 1.26
ABCD4-228ENST00000557588 CRISPLD2Q9H0B8 497 aa22.94■■□□□ 1.26
ABCD4-228ENST00000557588 USP44Q9H0E7 712 aa22.94■■□□□ 1.26
ABCD4-228ENST00000557588 AFG3L2Q9Y4W6 797 aa22.94■■□□□ 1.26
ABCD4-228ENST00000557588 MYH2Q9UKX2 1941 aa22.94■■□□□ 1.26
ABCD4-228ENST00000557588 DLL1O00548 723 aa22.93■■□□□ 1.26
ABCD4-228ENST00000557588 TNPO2O14787 897 aaKnown RBP22.93■■□□□ 1.26
ABCD4-228ENST00000557588 ENTPD3O75355 529 aa22.93■■□□□ 1.26
ABCD4-228ENST00000557588 MRPL50Q8N5N7 158 aaKnown RBP22.93■■□□□ 1.26
ABCD4-228ENST00000557588 SLC17A8Q8NDX2 589 aa22.93■■□□□ 1.26
ABCD4-228ENST00000557588 DEFB118Q96PH6 123 aa22.93■■□□□ 1.26
ABCD4-228ENST00000557588 LOC285556D6RIA3 1793 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 GAKO14976 1311 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 ZBTB22O15209 634 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 RGS3P49796 1198 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 MAP3K10Q02779 954 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 GADL1Q6ZQY3 521 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 ATG9AQ7Z3C6 839 aa22.92■■□□□ 1.26
ABCD4-228ENST00000557588 SMCR8Q8TEV9 937 aaPredicted RBP22.92■■□□□ 1.26
ABCD4-228ENST00000557588 A0A0C4DFX4 3053 aa22.91■■□□□ 1.26
ABCD4-228ENST00000557588 SEMA3EO15041 775 aa22.91■■□□□ 1.26
ABCD4-228ENST00000557588 SH3BP5LQ7L8J4 393 aa22.91■■□□□ 1.26
ABCD4-228ENST00000557588 GNL3LQ9NVN8 582 aaKnown RBP22.91■■□□□ 1.26
ABCD4-228ENST00000557588 CUL9Q8IWT3 2517 aa22.91■■□□□ 1.26
ABCD4-228ENST00000557588 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
ABCD4-228ENST00000557588 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
ABCD4-228ENST00000557588 LRCH3Q96II8 777 aa22.9■■□□□ 1.26
ABCD4-228ENST00000557588 FBXO3Q9UK99 471 aa22.9■■□□□ 1.26
ABCD4-228ENST00000557588 STAP2Q9UGK3 403 aa22.89■■□□□ 1.25
ABCD4-228ENST00000557588 DENND2AQ9ULE3 1009 aa22.89■■□□□ 1.25
ABCD4-228ENST00000557588 AGTPBP1Q9UPW5 1226 aa22.89■■□□□ 1.25
ABCD4-228ENST00000557588 DOCK3Q8IZD9 2030 aa22.89■■□□□ 1.25
ABCD4-228ENST00000557588 CTNND1O60716 968 aaKnown RBP22.88■■□□□ 1.25
ABCD4-228ENST00000557588 CIAO1O76071 339 aa22.88■■□□□ 1.25
ABCD4-228ENST00000557588 FAM110CQ1W6H9 321 aa22.88■■□□□ 1.25
ABCD4-228ENST00000557588 COA7Q96BR5 231 aa22.88■■□□□ 1.25
ABCD4-228ENST00000557588 PAWRQ96IZ0 340 aaKnown RBP22.88■■□□□ 1.25
ABCD4-228ENST00000557588 LRRFIP2Q9Y608 721 aaKnown RBP22.88■■□□□ 1.25
ABCD4-228ENST00000557588 ZNF521Q96K83 1311 aa22.87■■□□□ 1.25
ABCD4-228ENST00000557588 ZGPATQ8N5A5 531 aaKnown RBP22.87■■□□□ 1.25
ABCD4-228ENST00000557588 GDF15Q99988 308 aa22.87■■□□□ 1.25
ABCD4-228ENST00000557588 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.87■■□□□ 1.259e-6■■□□□ 13.2
ABCD4-228ENST00000557588 DDTLA6NHG4 134 aaPredicted RBP22.86■■□□□ 1.25
ABCD4-228ENST00000557588 TRIM75PA6NK02 468 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 BMP8BP34820 402 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 PHKA1P46020 1223 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 GPR153Q6NV75 609 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 NECAB2Q7Z6G3 386 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 ZSCAN29Q8IWY8 852 aaPredicted RBP22.86■■□□□ 1.25
ABCD4-228ENST00000557588 ANKRD13CQ8N6S4 541 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 ANKLE1Q8NAG6 615 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 DIS3LQ8TF46 1054 aaKnown RBP22.86■■□□□ 1.25
ABCD4-228ENST00000557588 PNMA3Q9UL41 463 aa22.86■■□□□ 1.25
ABCD4-228ENST00000557588 DDX60LQ5H9U9 1706 aaKnown RBP22.85■■□□□ 1.25
ABCD4-228ENST00000557588 PDS5AQ29RF7 1337 aaKnown RBP22.85■■□□□ 1.25
ABCD4-228ENST00000557588 DDX4Q9NQI0 724 aaKnown RBP22.85■■□□□ 1.25
ABCD4-228ENST00000557588 TAOK2Q9UL54 1235 aa22.85■■□□□ 1.25
ABCD4-228ENST00000557588 ATAD5Q96QE3 1844 aa22.85■■□□□ 1.25
ABCD4-228ENST00000557588 SLURP2P0DP57 97 aa22.84■■□□□ 1.25
ABCD4-228ENST00000557588 TREML2Q5T2D2 321 aa22.84■■□□□ 1.25
ABCD4-228ENST00000557588 PROCA1Q8NCQ7 364 aaPredicted RBP22.84■■□□□ 1.25
ABCD4-228ENST00000557588 SIL1Q9H173 461 aa22.84■■□□□ 1.25
ABCD4-228ENST00000557588 CEP126Q9P2H0 1117 aa22.84■■□□□ 1.25
ABCD4-228ENST00000557588 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.84■■□□□ 1.25
ABCD4-228ENST00000557588 HMGCRP04035 888 aa22.83■■□□□ 1.25
ABCD4-228ENST00000557588 DZIP1Q86YF9 867 aaKnown RBP22.83■■□□□ 1.25
ABCD4-228ENST00000557588 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
ABCD4-228ENST00000557588 FAM163AQ96GL9 167 aaPredicted RBP22.83■■□□□ 1.25
ABCD4-228ENST00000557588 COL2A1P02458 1487 aaPredicted RBP22.83■■□□□ 1.25
ABCD4-228ENST00000557588 TBC1D12O60347 775 aa22.82■■□□□ 1.24
ABCD4-228ENST00000557588 MNX1P50219 401 aaPredicted RBP22.82■■□□□ 1.24
ABCD4-228ENST00000557588 CCDC102BQ68D86 513 aa22.82■■□□□ 1.24
ABCD4-228ENST00000557588 CCDC84Q86UT8 332 aaPredicted RBP22.82■■□□□ 1.24
ABCD4-228ENST00000557588 SLF2Q8IX21 1173 aa22.82■■□□□ 1.24
ABCD4-228ENST00000557588 PLXNB2O15031 1838 aa22.82■■□□□ 1.24
ABCD4-228ENST00000557588 MROH7-TTC4A0A0A0MT08 1334 aa22.82■■□□□ 1.24
ABCD4-228ENST00000557588 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
ABCD4-228ENST00000557588 IL15P40933 162 aaPredicted RBP22.81■■□□□ 1.24
ABCD4-228ENST00000557588 BTDP43251 543 aa22.81■■□□□ 1.24
ABCD4-228ENST00000557588 GCLCP48506 637 aaPredicted RBP22.81■■□□□ 1.24
ABCD4-228ENST00000557588 PICALMQ13492 652 aa22.81■■□□□ 1.24
ABCD4-228ENST00000557588 RASGRF1Q13972 1273 aa22.81■■□□□ 1.24
ABCD4-228ENST00000557588 C7orf61Q8IZ16 206 aa22.81■■□□□ 1.24
ABCD4-228ENST00000557588 ADORA1P30542 326 aa22.8■■□□□ 1.24
ABCD4-228ENST00000557588 RPTORQ8N122 1335 aa22.8■■□□□ 1.24
ABCD4-228ENST00000557588 UNC80Q8N2C7 3258 aa22.79■■□□□ 1.24
ABCD4-228ENST00000557588 UBTFL1P0CB47 393 aaPredicted RBP22.79■■□□□ 1.24
ABCD4-228ENST00000557588 RHBDL3P58872 404 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms