RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ENC1O14682 589 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 GIPC1O14908 333 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 RNGTTO60942 597 aaKnown RBP8.04□□□□□ -1.12
VRK1-207ENST00000557352 HCLS1P14317 486 aaPredicted RBP8.04□□□□□ -1.12
VRK1-207ENST00000557352 BMP6P22004 513 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 CDK5R2Q13319 367 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
VRK1-207ENST00000557352 MPRIPQ6WCQ1 1025 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 VSIG10LQ86VR7 867 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 GPBAR1Q8TDU6 330 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 CEP44Q9C0F1 390 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 CBX8Q9HC52 389 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 CACNA2D2Q9NY47 1150 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 PPM1HQ9ULR3 514 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
VRK1-207ENST00000557352 FBXO24O75426 580 aa8.03□□□□□ -1.12
VRK1-207ENST00000557352 PAGE1O75459 146 aa8.03□□□□□ -1.12
VRK1-207ENST00000557352 NEFMP07197 916 aa8.03□□□□□ -1.12
VRK1-207ENST00000557352 P4HBP07237 508 aaKnown RBP8.03□□□□□ -1.12
VRK1-207ENST00000557352 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
VRK1-207ENST00000557352 GRIN3AQ8TCU5 1115 aa8.03□□□□□ -1.12
VRK1-207ENST00000557352 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 CYP27C1Q4G0S4 372 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 CBLL1Q75N03 491 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 FBXL18Q96ME1 805 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 PCOLCE2Q9UKZ9 415 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
VRK1-207ENST00000557352 ERVK-24P63145 666 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 RNF214Q8ND24 703 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 ANKRD24Q8TF21 1146 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 ISL2Q96A47 359 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 C12orf49Q9H741 205 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 SAMM50Q9Y512 469 aa8.01□□□□□ -1.13
VRK1-207ENST00000557352 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
VRK1-207ENST00000557352 RASIP1Q5U651 963 aa8□□□□□ -1.13
VRK1-207ENST00000557352 TP53INP2Q8IXH6 220 aa8□□□□□ -1.13
VRK1-207ENST00000557352 FAM8A1Q9UBU6 413 aa8□□□□□ -1.13
VRK1-207ENST00000557352 LEFTY1O75610 366 aa7.99□□□□□ -1.13
VRK1-207ENST00000557352 TRIM37O94972 964 aa7.99□□□□□ -1.13
VRK1-207ENST00000557352 LDHBP07195 334 aaKnown RBP7.99□□□□□ -1.13
VRK1-207ENST00000557352 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
VRK1-207ENST00000557352 SSU72Q9NP77 194 aaKnown RBP7.99□□□□□ -1.13
VRK1-207ENST00000557352 PAK6Q9NQU5 681 aaPredicted RBP7.99□□□□□ -1.13
VRK1-207ENST00000557352 CELA3AP09093 270 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 USP17L7P0C7H9 530 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 PPM1JQ5JR12 505 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 LLGL2Q6P1M3 1020 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.98□□□□□ -1.13
VRK1-207ENST00000557352 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 CSADQ9Y600 493 aa7.98□□□□□ -1.13
VRK1-207ENST00000557352 DCDC2CA8MYV0 355 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 NTF4P34130 210 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 LRRC14Q15048 493 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 FAM181AQ8N9Y4 354 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 BCL7CQ8WUZ0 217 aaPredicted RBP7.97□□□□□ -1.13
VRK1-207ENST00000557352 FRMD6Q96NE9 622 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 U3KQE9 123 aa7.97□□□□□ -1.13
VRK1-207ENST00000557352 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 RING1Q06587 406 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 C12orf40Q86WS4 652 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 PLD6Q8N2A8 252 aaKnown RBP7.96□□□□□ -1.14
VRK1-207ENST00000557352 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 NETO1Q8TDF5 533 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 CYP8B1Q9UNU6 501 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 SLC5A6Q9Y289 635 aa7.96□□□□□ -1.14
VRK1-207ENST00000557352 ITGB5P18084 799 aa7.95□□□□□ -1.14
VRK1-207ENST00000557352 GNA15P30679 374 aa7.95□□□□□ -1.14
VRK1-207ENST00000557352 SCARA3Q6AZY7 606 aa7.95□□□□□ -1.14
VRK1-207ENST00000557352 ZNF574Q6ZN55 896 aaPredicted RBP7.95□□□□□ -1.14
VRK1-207ENST00000557352 TOP6BLQ8N6T0 577 aa7.95□□□□□ -1.14
VRK1-207ENST00000557352 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
VRK1-207ENST00000557352 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.14
VRK1-207ENST00000557352 SPRED2Q7Z698 418 aa7.94□□□□□ -1.14
VRK1-207ENST00000557352 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
VRK1-207ENST00000557352 STK11IPQ8N1F8 1099 aa7.94□□□□□ -1.14
VRK1-207ENST00000557352 MISP3Q96FF7 219 aa7.94□□□□□ -1.14
VRK1-207ENST00000557352 MKNK2Q9HBH9 465 aa7.94□□□□□ -1.14
VRK1-207ENST00000557352 TTF2Q9UNY4 1162 aaKnown RBP7.94□□□□□ -1.14
VRK1-207ENST00000557352 FANCGO15287 622 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 PRPF40AO75400 957 aaKnown RBP7.93□□□□□ -1.14
VRK1-207ENST00000557352 EIF4BP23588 611 aaKnown RBP7.93□□□□□ -1.14
VRK1-207ENST00000557352 OXCT1P55809 520 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 BNIP3Q12983 259 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 ZBTB37Q5TC79 503 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 SV2BQ7L1I2 683 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 PICK1Q9NRD5 415 aa7.93□□□□□ -1.14
VRK1-207ENST00000557352 ANKRD33BA6NCL7 494 aa7.92□□□□□ -1.14
VRK1-207ENST00000557352 PTPN11Q06124 597 aaPredicted RBP7.92□□□□□ -1.14
VRK1-207ENST00000557352 SND1Q7KZF4 910 aaKnown RBP eCLIP7.92□□□□□ -1.14
VRK1-207ENST00000557352 FAM214BQ7L5A3 538 aa7.92□□□□□ -1.14
VRK1-207ENST00000557352 HEXIM2Q96MH2 286 aaKnown RBP7.92□□□□□ -1.14
VRK1-207ENST00000557352 RNF19AQ9NV58 838 aa7.92□□□□□ -1.14
VRK1-207ENST00000557352 CEACAM5P06731 702 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 INPP5AQ14642 412 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 IFI16Q16666 785 aaKnown RBP7.91□□□□□ -1.14
VRK1-207ENST00000557352 LRFN4Q6PJG9 635 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms