RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PDE6BP35913 854 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 RGS19P49795 217 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 MAP2K1Q02750 393 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 MTFR1Q15390 333 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 C1orf141Q5JVX7 400 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 SCG3Q8WXD2 468 aaKnown RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 PKNOX2Q96KN3 472 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 TSPAN10Q9H1Z9 355 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 MAP2P11137 1827 aaKnown RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 TAF1LQ8IZX4 1826 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 A0A087WZG4 1122 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 ITGB2P05107 769 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 NOS2P35228 1153 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 PTK7Q13308 1070 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 KANK3Q6NY19 840 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 NSFL1CQ9UNZ2 370 aaKnown RBP6.6□□□□□ -1.35
ATXN3-247ENST00000557311 HCN4Q9Y3Q4 1203 aa6.6□□□□□ -1.35
ATXN3-247ENST00000557311 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-247ENST00000557311 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 PSMA6P60900 246 aaKnown RBP6.59□□□□□ -1.35
ATXN3-247ENST00000557311 CCDC82Q8N4S0 544 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 C1orf216Q8TAB5 229 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 NOVA2Q9UNW9 492 aaKnown RBP6.59□□□□□ -1.35
ATXN3-247ENST00000557311 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
ATXN3-247ENST00000557311 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-247ENST00000557311 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 A0A1W2PNR3 127 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 STARD3NLO95772 234 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 MX2P20592 715 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 TXLNAP40222 546 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-247ENST00000557311 TEAD4Q15561 434 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-247ENST00000557311 FIGNL1Q6PIW4 674 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-247ENST00000557311 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 RHPN1Q8TCX5 695 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 ARID3AQ99856 593 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 IQSEC3Q9UPP2 1182 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-247ENST00000557311 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
ATXN3-247ENST00000557311 M0R2N6 131 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 KHNYNO15037 678 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 IGHA1P01876 353 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 EPHX2P34913 555 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 MAP3K10Q02779 954 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 GAS2L2Q8NHY3 880 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 ACDQ96AP0 544 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 ZDHHC3Q9NYG2 299 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATXN3-247ENST00000557311 ITGB4P16144 1822 aa6.57□□□□□ -1.36
ATXN3-247ENST00000557311 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 DCDC2BA2VCK2 349 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 ATXN7O15265 892 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-247ENST00000557311 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
ATXN3-247ENST00000557311 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 BMP4P12644 408 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 ATP4AP20648 1035 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 EPHA4P54764 986 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 FOXK2Q01167 660 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 LRRC69Q6ZNQ3 347 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 ZDHHC1Q8WTX9 485 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms