RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.1□□□□□ -0.47
RIPK3-205ENST00000557253 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 A0A0C4DFX4 3053 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
RIPK3-205ENST00000557253 PTPRAP18433 802 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
RIPK3-205ENST00000557253 NECAB2Q7Z6G3 386 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 GDF15Q99988 308 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 PICK1Q9NRD5 415 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 AFG3L2Q9Y4W6 797 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 MYH13Q9UKX3 1938 aa12.09□□□□□ -0.47
RIPK3-205ENST00000557253 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 FGFR2P21802 821 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 PRDX5P30044 214 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 BMP8BP34820 402 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 IRF5Q13568 498 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
RIPK3-205ENST00000557253 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
RIPK3-205ENST00000557253 SCYL3Q8IZE3 742 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
RIPK3-205ENST00000557253 SMCR8Q8TEV9 937 aaPredicted RBP12.08□□□□□ -0.48
RIPK3-205ENST00000557253 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.48
RIPK3-205ENST00000557253 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
RIPK3-205ENST00000557253 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
RIPK3-205ENST00000557253 TRIM32Q13049 653 aa12.07□□□□□ -0.48
RIPK3-205ENST00000557253 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
RIPK3-205ENST00000557253 COA7Q96BR5 231 aa12.07□□□□□ -0.48
RIPK3-205ENST00000557253 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
RIPK3-205ENST00000557253 UTYO14607 1347 aa12.07□□□□□ -0.48
RIPK3-205ENST00000557253 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
RIPK3-205ENST00000557253 SLC5A1P13866 664 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
RIPK3-205ENST00000557253 RGS3P49796 1198 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
RIPK3-205ENST00000557253 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 UNC80Q8N2C7 3258 aa12.06□□□□□ -0.48
RIPK3-205ENST00000557253 DDX60LQ5H9U9 1706 aaKnown RBP12.06□□□□□ -0.48
RIPK3-205ENST00000557253 PHIPQ8WWQ0 1821 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
RIPK3-205ENST00000557253 CAPN2P17655 700 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 TDHQ8IZJ6 230 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 LPIN2Q92539 896 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 COL25A1Q9BXS0 654 aaPredicted RBP12.05□□□□□ -0.48
RIPK3-205ENST00000557253 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 MTMR10Q9NXD2 777 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 SLC45A1Q9Y2W3 748 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 PTPRFP10586 1907 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
RIPK3-205ENST00000557253 DOCK1Q14185 1865 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 PICALMQ13492 652 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 LRIT3Q3SXY7 679 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 UBE2OQ9C0C9 1292 aaKnown RBP12.04□□□□□ -0.48
RIPK3-205ENST00000557253 C11orf49Q9H6J7 331 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 HMX1Q9NP08 348 aaPredicted RBP12.04□□□□□ -0.48
RIPK3-205ENST00000557253 AGTPBP1Q9UPW5 1226 aa12.04□□□□□ -0.48
RIPK3-205ENST00000557253 EYA2O00167 538 aa12.03□□□□□ -0.48
RIPK3-205ENST00000557253 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
RIPK3-205ENST00000557253 ENTPD3O75355 529 aa12.03□□□□□ -0.48
RIPK3-205ENST00000557253 HMGCRP04035 888 aa12.03□□□□□ -0.48
RIPK3-205ENST00000557253 DDX4Q9NQI0 724 aaKnown RBP12.03□□□□□ -0.48
RIPK3-205ENST00000557253 RPTORQ8N122 1335 aa12.03□□□□□ -0.48
RIPK3-205ENST00000557253 MYH2Q9UKX2 1941 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 FAM196BA6NMK8 535 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
RIPK3-205ENST00000557253 MAP3K10Q02779 954 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 FAM110CQ1W6H9 321 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
RIPK3-205ENST00000557253 ATG9AQ7Z3C6 839 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 IDI2Q9BXS1 227 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 SIL1Q9H173 461 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 PNMA3Q9UL41 463 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 DOCK3Q8IZD9 2030 aa12.02□□□□□ -0.49
RIPK3-205ENST00000557253 PEX10O60683 326 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 CYP2B6P20813 491 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 PHKA1P46020 1223 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
RIPK3-205ENST00000557253 SPP2Q13103 211 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 ATP2B3Q16720 1220 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 TRIB2Q92519 343 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 FAM161BQ96MY7 647 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
RIPK3-205ENST00000557253 DENND2AQ9ULE3 1009 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 PFASO15067 1338 aa12.01□□□□□ -0.49
RIPK3-205ENST00000557253 PLXNB2O15031 1838 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 BTDP43251 543 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 HMGCS2P54868 508 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
RIPK3-205ENST00000557253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms