RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 RAI14Q9P0K7 980 aa27.82■■■□□ 2.04
TMEM260-214ENST00000556975 DBNLQ9UJU6 430 aaKnown RBP27.82■■■□□ 2.04
TMEM260-214ENST00000556975 ATRNL1Q5VV63 1379 aa27.82■■■□□ 2.04
TMEM260-214ENST00000556975 CRHR2Q13324 411 aa27.81■■■□□ 2.04
TMEM260-214ENST00000556975 SH3BP5LQ7L8J4 393 aa27.81■■■□□ 2.04
TMEM260-214ENST00000556975 ERC1Q8IUD2 1116 aa27.81■■■□□ 2.04
TMEM260-214ENST00000556975 RPAP2Q8IXW5 612 aaPredicted RBP27.81■■■□□ 2.04
TMEM260-214ENST00000556975 DDX4Q9NQI0 724 aaKnown RBP27.81■■■□□ 2.04
TMEM260-214ENST00000556975 ZBTB40Q9NUA8 1239 aa27.81■■■□□ 2.04
TMEM260-214ENST00000556975 LRP2BPQ9P2M1 347 aa27.81■■■□□ 2.04
TMEM260-214ENST00000556975 IRF6O14896 467 aa27.8■■■□□ 2.04
TMEM260-214ENST00000556975 NOL9Q5SY16 702 aaKnown RBP27.8■■■□□ 2.04
TMEM260-214ENST00000556975 SNRKQ9NRH2 765 aa27.8■■■□□ 2.04
TMEM260-214ENST00000556975 COG6Q9Y2V7 657 aa27.8■■■□□ 2.04
TMEM260-214ENST00000556975 CETPP11597 493 aa27.79■■■□□ 2.04
TMEM260-214ENST00000556975 HSP90AB4PQ58FF6 505 aa27.79■■■□□ 2.04
TMEM260-214ENST00000556975 CCDC8Q9H0W5 538 aaPredicted RBP27.79■■■□□ 2.04
TMEM260-214ENST00000556975 CHMP4BQ9H444 224 aaKnown RBP27.79■■■□□ 2.04
TMEM260-214ENST00000556975 EXOC6BQ9Y2D4 811 aa27.79■■■□□ 2.04
TMEM260-214ENST00000556975 DDTLA6NHG4 134 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-214ENST00000556975 PHF20L1A8MW92 1017 aa27.78■■■□□ 2.04
TMEM260-214ENST00000556975 CYP2E1P05181 493 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-214ENST00000556975 SNAPC2Q13487 334 aa27.78■■■□□ 2.04
TMEM260-214ENST00000556975 ZCCHC17Q9NP64 241 aaKnown RBP27.78■■■□□ 2.04
TMEM260-214ENST00000556975 ZSCAN29Q8IWY8 852 aaPredicted RBP27.77■■■□□ 2.04
TMEM260-214ENST00000556975 FAM43AQ8N2R8 423 aa27.77■■■□□ 2.04
TMEM260-214ENST00000556975 TLR7Q9NYK1 1049 aaKnown RBP27.77■■■□□ 2.04
TMEM260-214ENST00000556975 TNRC18O15417 2968 aaPredicted RBP27.77■■■□□ 2.04
TMEM260-214ENST00000556975 DOCK2Q92608 1830 aa27.76■■■□□ 2.04
TMEM260-214ENST00000556975 SOX10P56693 466 aa27.76■■■□□ 2.03
TMEM260-214ENST00000556975 PICALMQ13492 652 aa27.76■■■□□ 2.03
TMEM260-214ENST00000556975 FBXO46Q6PJ61 603 aaPredicted RBP27.76■■■□□ 2.03
TMEM260-214ENST00000556975 KCNH4Q9UQ05 1017 aa27.76■■■□□ 2.03
TMEM260-214ENST00000556975 ZAP70P43403 619 aa27.75■■■□□ 2.03
TMEM260-214ENST00000556975 PDE3AQ14432 1141 aa27.75■■■□□ 2.03
TMEM260-214ENST00000556975 ZFYVE28Q9HCC9 887 aa27.75■■■□□ 2.03
TMEM260-214ENST00000556975 HPS5Q9UPZ3 1129 aa27.75■■■□□ 2.03
TMEM260-214ENST00000556975 TBC1D12O60347 775 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 HMMRO75330 724 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 PPP4CP60510 307 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 TAF1CQ15572 869 aaPredicted RBP27.74■■■□□ 2.03
TMEM260-214ENST00000556975 NAA16Q6N069 864 aaPredicted RBP27.74■■■□□ 2.03
TMEM260-214ENST00000556975 SIRT2Q8IXJ6 389 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 RHPN1Q8TCX5 695 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 ERO1AQ96HE7 468 aa27.74■■■□□ 2.03
TMEM260-214ENST00000556975 COL2A1P02458 1487 aaPredicted RBP27.73■■■□□ 2.03
TMEM260-214ENST00000556975 BTBD19C9JJ37 291 aa27.73■■■□□ 2.03
TMEM260-214ENST00000556975 SP3Q02447 781 aa27.73■■■□□ 2.03
TMEM260-214ENST00000556975 BAG3O95817 575 aa27.72■■■□□ 2.03
TMEM260-214ENST00000556975 SCYL3Q8IZE3 742 aa27.72■■■□□ 2.03
TMEM260-214ENST00000556975 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.72■■■□□ 2.03
TMEM260-214ENST00000556975 NOL10Q9BSC4 688 aaKnown RBP27.72■■■□□ 2.03
TMEM260-214ENST00000556975 PIH1D3Q9NQM4 214 aaKnown RBP27.72■■■□□ 2.03
TMEM260-214ENST00000556975 PLCG2P16885 1265 aa27.71■■■□□ 2.03
TMEM260-214ENST00000556975 OTOP1Q7RTM1 612 aa27.71■■■□□ 2.03
TMEM260-214ENST00000556975 AACSQ86V21 672 aa27.71■■■□□ 2.03
TMEM260-214ENST00000556975 TEX11Q8IYF3 940 aa27.71■■■□□ 2.03
TMEM260-214ENST00000556975 OSBPL5Q9H0X9 879 aaPredicted RBP27.71■■■□□ 2.03
TMEM260-214ENST00000556975 MAST2Q6P0Q8 1798 aa27.71■■■□□ 2.03
TMEM260-214ENST00000556975 CXCL11O14625 94 aa27.7■■■□□ 2.02
TMEM260-214ENST00000556975 CTNND1O60716 968 aaKnown RBP27.7■■■□□ 2.02
TMEM260-214ENST00000556975 SH3RF3Q8TEJ3 882 aaPredicted RBP27.7■■■□□ 2.02
TMEM260-214ENST00000556975 KIF1BPQ96EK5 621 aa27.7■■■□□ 2.02
TMEM260-214ENST00000556975 TRIM17Q9Y577 477 aa27.7■■■□□ 2.02
TMEM260-214ENST00000556975 MYO5AQ9Y4I1 1855 aaKnown RBP27.7■■■□□ 2.02
TMEM260-214ENST00000556975 TLR2O60603 784 aa27.69■■■□□ 2.02
TMEM260-214ENST00000556975 ANKRD23Q86SG2 305 aa27.69■■■□□ 2.02
TMEM260-214ENST00000556975 CD99L2Q8TCZ2 262 aa27.69■■■□□ 2.02
TMEM260-214ENST00000556975 IL1RAPL2Q9NP60 686 aa27.69■■■□□ 2.02
TMEM260-214ENST00000556975 AATFQ9NY61 560 aaKnown RBP eCLIP27.69■■■□□ 2.02
TMEM260-214ENST00000556975 RAB11FIP3O75154 756 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 SLURP2P0DP57 97 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 PTPRAP18433 802 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 MOGSQ13724 837 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 C20orf194Q5TEA3 1177 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 TMED8Q6PL24 325 aaPredicted RBP27.68■■■□□ 2.02
TMEM260-214ENST00000556975 ADGRA1Q86SQ6 560 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 CLASRPQ8N2M8 674 aaKnown RBP27.68■■■□□ 2.02
TMEM260-214ENST00000556975 PICK1Q9NRD5 415 aa27.68■■■□□ 2.02
TMEM260-214ENST00000556975 DHX36Q9H2U1 1008 aaKnown RBP27.66■■■□□ 2.02
TMEM260-214ENST00000556975 EFCC1Q9HA90 598 aa27.66■■■□□ 2.02
TMEM260-214ENST00000556975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.66■■■□□ 2.02
TMEM260-214ENST00000556975 AFG3L2Q9Y4W6 797 aa27.66■■■□□ 2.02
TMEM260-214ENST00000556975 ZHX2Q9Y6X8 837 aa27.66■■■□□ 2.02
TMEM260-214ENST00000556975 IDH1O75874 414 aaKnown RBP27.64■■■□□ 2.02
TMEM260-214ENST00000556975 SLC34A2O95436 690 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 CAP1Q01518 475 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 ARHGEF6Q15052 776 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.64■■■□□ 2.02
TMEM260-214ENST00000556975 ANTXR1Q9H6X2 564 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 PI4KBQ9UBF8 816 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 HERC5Q9UII4 1024 aaKnown RBP27.64■■■□□ 2.02
TMEM260-214ENST00000556975 PTPN22Q9Y2R2 807 aa27.64■■■□□ 2.02
TMEM260-214ENST00000556975 A0A0G2JLL6 359 aaPredicted RBP27.63■■■□□ 2.01
TMEM260-214ENST00000556975 PDHXO00330 501 aa27.63■■■□□ 2.01
TMEM260-214ENST00000556975 CYP7A1P22680 504 aa27.63■■■□□ 2.01
TMEM260-214ENST00000556975 PRRT2Q7Z6L0 340 aaPredicted RBP27.63■■■□□ 2.01
TMEM260-214ENST00000556975 CERS3Q8IU89 383 aa27.63■■■□□ 2.01
TMEM260-214ENST00000556975 TGFBRAP1Q8WUH2 860 aa27.63■■■□□ 2.01
TMEM260-214ENST00000556975 NDUFB9Q9Y6M9 179 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms