RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SGPL1O95470 568 aa11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 ELNP15502 786 aa11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 PTPRAP18433 802 aa11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
HNRNPC-227ENST00000556897 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 MGAMO43451 1857 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 TNPO2O14787 897 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 EVI5O60447 810 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 INHAP05111 366 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 RGS3P49796 1198 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 DEFB118Q96PH6 123 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 PTPRCP08575 1304 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 COL6A3P12111 3177 aa11.28□□□□□ -0.6
HNRNPC-227ENST00000556897 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 TFRCP02786 760 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 PXYLP1Q8TE99 480 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 SIL1Q9H173 461 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
HNRNPC-227ENST00000556897 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 ENTPD3O75355 529 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 PHKA1P46020 1223 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 IRF5Q13568 498 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 IDI2Q9BXS1 227 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 SLC45A1Q9Y2W3 748 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 LRRFIP2Q9Y608 721 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
HNRNPC-227ENST00000556897 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 CUL9Q8IWT3 2517 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 DLL1O00548 723 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 ANP32CO43423 234 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 CIAO1O76071 339 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 DENND2AQ9ULE3 1009 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 GAKO14976 1311 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 RFX7Q2KHR2 1363 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 PTPRFP10586 1907 aa11.25□□□□□ -0.61
HNRNPC-227ENST00000556897 SEMA3EO15041 775 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 ADORA1P30542 326 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 MAP3K10Q02779 954 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 PICALMQ13492 652 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 DZIP1Q86YF9 867 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 DIS3LQ8TF46 1054 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 COA7Q96BR5 231 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 AGTPBP1Q9UPW5 1226 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
HNRNPC-227ENST00000556897 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-227ENST00000556897 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
HNRNPC-227ENST00000556897 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-227ENST00000556897 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.612e-28■■■■■ 30.3
HNRNPC-227ENST00000556897 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
HNRNPC-227ENST00000556897 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 CAPN2P17655 700 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 IL15P40933 162 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 BTDP43251 543 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 NECAB2Q7Z6G3 386 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 PA2G4Q9UQ80 394 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-227ENST00000556897 ALPK3Q96L96 1907 aa11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 HMGCRP04035 888 aa11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 TIMM10P62072 90 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms