RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
EFCAB11-212ENST00000556639 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
EFCAB11-212ENST00000556639 BAG3O95817 575 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 USP5P45974 858 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 RHBDL3P58872 404 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 SCRN1Q12765 414 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 ATP8A2Q9NTI2 1148 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 GAKO14976 1311 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 SAP30BPQ9UHR5 308 aaKnown RBP16.31■□□□□ 0.2
EFCAB11-212ENST00000556639 GJB2P29033 226 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 ZNF646O15015 1829 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 JAK2O60674 1132 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
EFCAB11-212ENST00000556639 STRIP1Q5VSL9 837 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 DYNLL2Q96FJ2 89 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 PSMD1Q99460 953 aa16.29■□□□□ 0.2
EFCAB11-212ENST00000556639 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 KLF18A0A0U1RQI7 1052 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 PFKFB2O60825 505 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 RXRAP19793 462 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 PLCD1P51178 756 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 RAD17O75943 681 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 KRT23Q9C075 422 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 HPS5Q9UPZ3 1129 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 SUGT1Q9Y2Z0 365 aa16.28■□□□□ 0.2
EFCAB11-212ENST00000556639 IGSF3O75054 1194 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 NUCB2P80303 420 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 MYL10Q9BUA6 226 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.2
EFCAB11-212ENST00000556639 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 SYT1P21579 422 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 EVCP57679 992 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 PICALMQ13492 652 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 SBK1Q52WX2 424 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 TMEM67Q5HYA8 995 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 C12orf60Q5U649 245 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 SLF2Q8IX21 1173 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 DDX11Q96FC9 970 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.19
EFCAB11-212ENST00000556639 FLT1P17948 1338 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 WDR19Q8NEZ3 1342 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 RANBP6O60518 1105 aaKnown RBP16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 BRD1O95696 1058 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 CRKP46108 304 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 LAMB1P07942 1786 aa16.26■□□□□ 0.19
EFCAB11-212ENST00000556639 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 NFKBIEO00221 500 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 FGRP09769 529 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 CCDC144CPQ8IYA2 1237 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 CACNB3P54284 484 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 NSUN7Q8NE18 718 aaKnown RBP16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 TEKT1Q969V4 418 aa16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
EFCAB11-212ENST00000556639 PSMD14O00487 310 aa16.24■□□□□ 0.19
EFCAB11-212ENST00000556639 NMT2O60551 498 aa16.24■□□□□ 0.19
EFCAB11-212ENST00000556639 WDHD1O75717 1129 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms