RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 METAP2P50579 478 aaKnown RBP eCLIP6.27□□□□□ -1.41
GPHN-213ENST00000556501 RCAN1P53805 252 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PDAP1Q13442 181 aaKnown RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 NTRK3Q16288 839 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ANO1Q5XXA6 986 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 CPLX2Q6PUV4 134 aaKnown RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 BARGINQ6ZT62 677 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 RAB11FIP4Q86YS3 637 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 CEP57L1Q8IYX8 460 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 MPNDQ8N594 471 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 MARCH10Q8NA82 808 aaPredicted RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 NKX2-3Q8TAU0 364 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 IGDCC4Q8TDY8 1250 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 MRFAP1L1Q96HT8 127 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 MPHOSPH8Q99549 860 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ALG1Q9BT22 464 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 TRIM5Q9C035 493 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 SEC31BQ9NQW1 1179 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ANO10Q9NW15 660 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PYCARDQ9ULZ3 195 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ZNF652Q9Y2D9 606 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 CLIC4Q9Y696 253 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 SBF2Q86WG5 1849 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 THSD7AQ9UPZ6 1657 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 TAF1P21675 1872 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 GOLGA6L19H0YKK7 550 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 ZBTB43O43298 467 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 APPP05067 770 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 CDC27P30260 824 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 SLC39A14Q15043 492 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 AXDND1Q5T1B0 1012 aaPredicted RBP6.26□□□□□ -1.41
GPHN-213ENST00000556501 AKNAD1Q5T1N1 836 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 KRT40Q6A162 431 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 SYNE3Q6ZMZ3 975 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 MICU3Q86XE3 530 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 VPS37DQ86XT2 251 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 C17orf53Q8N3J3 647 aaPredicted RBP6.26□□□□□ -1.41
GPHN-213ENST00000556501 LCORLQ8N3X6 602 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 MAGEB6Q8N7X4 407 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 SPC24Q8NBT2 197 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 MYRIPQ8NFW9 859 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 CDC5LQ99459 802 aaKnown RBP6.26□□□□□ -1.41
GPHN-213ENST00000556501 BPIFA3Q9BQP9 254 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 MFRPQ9BY79 579 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 NACAP1Q9BZK3 213 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 KRT23Q9C075 422 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 NAPBQ9H115 298 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 ARMT1Q9H993 441 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 FAM217BQ9NTX9 383 aaPredicted RBP6.26□□□□□ -1.41
GPHN-213ENST00000556501 NIP7Q9Y221 180 aaKnown RBP eCLIP6.26□□□□□ -1.41
GPHN-213ENST00000556501 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 TAF1LQ8IZX4 1826 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 MYH2Q9UKX2 1941 aa6.26□□□□□ -1.41
GPHN-213ENST00000556501 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 LY75O60449 1722 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 BAZ2AQ9UIF9 1905 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 A0A1B0GVL5 298 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 IFIT3O14879 490 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 RANBP6O60518 1105 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 ZMYND10O75800 440 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 POLR3DP05423 398 aaPredicted RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 PFKFB1P16118 471 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 IFNAR1P17181 557 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 CMA1P23946 247 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 U2AF2P26368 475 aaKnown RBP eCLIP6.25□□□□□ -1.41
GPHN-213ENST00000556501 GTF2F1P35269 517 aaKnown RBP eCLIP6.25□□□□□ -1.41
GPHN-213ENST00000556501 IARSP41252 1262 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 TDO2P48775 406 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 BCAMP50895 628 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 NDUFA8P51970 172 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 CTDSPL2Q05D32 466 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 CHRNDQ07001 517 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 PTPAQ15257 358 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 SF3B3Q15393 1217 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 SF3A1Q15459 793 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 CLEC4GQ6UXB4 293 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 NFXL1Q6ZNB6 911 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 CCDC186Q7Z3E2 898 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 DHX40Q8IX18 779 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 AOPEPQ8N6M6 819 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 JMYQ8N9B5 988 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 WASF1Q92558 559 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 ACSBG1Q96GR2 724 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 TIGD1Q96MW7 591 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 AIFM3Q96NN9 605 aa6.25□□□□□ -1.41
GPHN-213ENST00000556501 NAT10Q9H0A0 1025 aaKnown RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 RNF41Q9H4P4 317 aaPredicted RBP6.25□□□□□ -1.41
GPHN-213ENST00000556501 GJB4Q9NTQ9 266 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms