RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ANXA1P04083 346 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 FGRP09769 529 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 PHKG2P15735 406 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 DNM1Q05193 864 aaKnown RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 ATL3Q6DD88 541 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 LLPHQ9BRT6 129 aaKnown RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 ZSCAN16Q9H4T2 348 aaPredicted RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 PARP2Q9UGN5 583 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 R3HCC1Q9Y3T6 440 aaKnown RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 SNRPA1P09661 255 aaKnown RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 PTGER2P43116 358 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 PCGF5Q86SE9 256 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 RGL4Q8IZJ4 473 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
PCNX1-211ENST00000556272 DDX17Q92841 729 aaKnown RBP8.59□□□□□ -1.03
PCNX1-211ENST00000556272 TJP1Q07157 1748 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 TAF5LO75529 589 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 DCAF5Q96JK2 942 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 KIF3AQ9Y496 699 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 LAMA4Q16363 1823 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 HCLS1P14317 486 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-211ENST00000556272 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-211ENST00000556272 MAP3K11Q16584 847 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.58□□□□□ -1.04
PCNX1-211ENST00000556272 FPGT-TNNI3KV9GXZ4 949 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 CPDO75976 1380 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 MEGF6O75095 1541 aa8.58□□□□□ -1.04
PCNX1-211ENST00000556272 UQCRHLA0A096LP55 91 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 VPS37CA5D8V6 355 aaPredicted RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 UQCRHP07919 91 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 ZNF76P36508 570 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 MYRIPQ8NFW9 859 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 ENOX1Q8TC92 643 aaKnown RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 GTF3C6Q969F1 213 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 HAUS7Q99871 368 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 NUP62CLQ9H1M0 184 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 INPP5FQ9Y2H2 1132 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PLBD2Q8NHP8 589 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 AVENQ9NQS1 362 aaPredicted RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 AXIN2Q9Y2T1 843 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 CPA1P15085 419 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 SERINC3Q13530 473 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 NOLC1Q14978 699 aaKnown RBP eCLIP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PLEKHG4Q58EX7 1191 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 TTC6Q86TZ1 520 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 FERMT3Q86UX7 667 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 FBXL16Q8N461 479 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 MRFAP1L1Q96HT8 127 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 NEK1Q96PY6 1258 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
PCNX1-211ENST00000556272 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
PCNX1-211ENST00000556272 PRMT3O60678 531 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 DSG3P32926 999 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 COPB2P35606 906 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
PCNX1-211ENST00000556272 MCMDC2Q4G0Z9 681 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 ICE2Q659A1 982 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 NAA16Q6N069 864 aaPredicted RBP8.56□□□□□ -1.04
PCNX1-211ENST00000556272 ZSCAN29Q8IWY8 852 aaPredicted RBP8.56□□□□□ -1.04
PCNX1-211ENST00000556272 MYD88Q99836 296 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 BOLA2Q9H3K6 86 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 CLSTN2Q9H4D0 955 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 TLR7Q9NYK1 1049 aaKnown RBP8.56□□□□□ -1.04
PCNX1-211ENST00000556272 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 SCINQ9Y6U3 715 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 ABCC12Q96J65 1359 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 TNS3Q68CZ2 1445 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 DDX60Q8IY21 1712 aaKnown RBP8.56□□□□□ -1.04
PCNX1-211ENST00000556272 ZNF609O15014 1411 aa8.56□□□□□ -1.04
PCNX1-211ENST00000556272 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms