RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
PCNX4-209ENST00000555569 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.31
PCNX4-209ENST00000555569 SNRKQ9NRH2 765 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 LRP2BPQ9P2M1 347 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
PCNX4-209ENST00000555569 MYO5AQ9Y4I1 1855 aaKnown RBP16.96■□□□□ 0.31
PCNX4-209ENST00000555569 MAST2Q6P0Q8 1798 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 ATRNL1Q5VV63 1379 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 RHBDL3P58872 404 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 PPATQ06203 517 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 PICALMQ13492 652 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
PCNX4-209ENST00000555569 SH3BP5LQ7L8J4 393 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 ZFYVE28Q9HCC9 887 aa16.95■□□□□ 0.3
PCNX4-209ENST00000555569 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-209ENST00000555569 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
PCNX4-209ENST00000555569 TRIM17Q9Y577 477 aa16.94■□□□□ 0.3
PCNX4-209ENST00000555569 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 BTBD19C9JJ37 291 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 SP3Q02447 781 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 OTOP1Q7RTM1 612 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 ERC1Q8IUD2 1116 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 CD99L2Q8TCZ2 262 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 ZCCHC17Q9NP64 241 aaKnown RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
PCNX4-209ENST00000555569 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
PCNX4-209ENST00000555569 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 SOX10P56693 466 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 MAP3K10Q02779 954 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
PCNX4-209ENST00000555569 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 DOCK1Q14185 1865 aa16.92■□□□□ 0.3
PCNX4-209ENST00000555569 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-209ENST00000555569 ZAP70P43403 619 aa16.91■□□□□ 0.3
PCNX4-209ENST00000555569 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
PCNX4-209ENST00000555569 NAA16Q6N069 864 aaPredicted RBP16.91■□□□□ 0.3
PCNX4-209ENST00000555569 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
PCNX4-209ENST00000555569 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
PCNX4-209ENST00000555569 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
PCNX4-209ENST00000555569 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
PCNX4-209ENST00000555569 CDK5RAP2Q96SN8 1893 aa16.9■□□□□ 0.3
PCNX4-209ENST00000555569 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
PCNX4-209ENST00000555569 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
PCNX4-209ENST00000555569 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 TLR2O60603 784 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 IGSF3O75054 1194 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 BAG3O95817 575 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 SLURP2P0DP57 97 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 ANKRD23Q86SG2 305 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 AACSQ86V21 672 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-209ENST00000555569 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-209ENST00000555569 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
PCNX4-209ENST00000555569 PIH1D3Q9NQM4 214 aaKnown RBP16.89■□□□□ 0.29
PCNX4-209ENST00000555569 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 PTPRFP10586 1907 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
PCNX4-209ENST00000555569 CXCL11O14625 94 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 TBC1D12O60347 775 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 CTNND1O60716 968 aaKnown RBP16.88■□□□□ 0.29
PCNX4-209ENST00000555569 HMMRO75330 724 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 PLCG2P16885 1265 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 PTPRAP18433 802 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 CAP1Q01518 475 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 ARHGEF6Q15052 776 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
PCNX4-209ENST00000555569 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCNX4-209ENST00000555569 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
PCNX4-209ENST00000555569 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 PDHXO00330 501 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 PPP4CP60510 307 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 MOGSQ13724 837 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCNX4-209ENST00000555569 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
PCNX4-209ENST00000555569 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 ADGRA1Q86SQ6 560 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
PCNX4-209ENST00000555569 IDH1O75874 414 aaKnown RBP16.85■□□□□ 0.29
PCNX4-209ENST00000555569 CYP7A1P22680 504 aa16.85■□□□□ 0.29
PCNX4-209ENST00000555569 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
PCNX4-209ENST00000555569 KIF22Q14807 665 aa16.85■□□□□ 0.29
PCNX4-209ENST00000555569 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
PCNX4-209ENST00000555569 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms