RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 GTF2IP78347 998 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 KIF23Q02241 960 aaPredicted RBP13.82□□□□□ -0.2
IFT43-210ENST00000555370 KRT32Q14532 448 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 MFSD14BQ5SR56 506 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 LCORLQ8N3X6 602 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 TM6SF1Q9BZW5 370 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 CEP290O15078 2479 aa13.82□□□□□ -0.2
IFT43-210ENST00000555370 H0YGN5 161 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 ECE2O60344 883 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 LDHCP07864 332 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 PSMA5P28066 241 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 NEK4P51957 841 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 ALX1Q15699 326 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 AOC3Q16853 763 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 FBXO46Q6PJ61 603 aaPredicted RBP13.81□□□□□ -0.2
IFT43-210ENST00000555370 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 JAKMIP1Q96N16 626 aaKnown RBP13.81□□□□□ -0.2
IFT43-210ENST00000555370 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
IFT43-210ENST00000555370 SUGT1Q9Y2Z0 365 aa13.81□□□□□ -0.2
IFT43-210ENST00000555370 MYH8P13535 1937 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 COL4A5P29400 1685 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 APPP05067 770 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 CYP21A2P08686 494 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 CASTP20810 708 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 FKBP1AP62942 108 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 GRIK5Q16478 980 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 IMMTQ16891 758 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 ADCK5Q3MIX3 580 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 GPC2Q8N158 579 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 RIOK1Q9BRS2 568 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 NOL10Q9BSC4 688 aaKnown RBP13.8□□□□□ -0.2
IFT43-210ENST00000555370 VPS33BQ9H267 617 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 MROH7-TTC4A0A0A0MT08 1334 aa13.8□□□□□ -0.2
IFT43-210ENST00000555370 K7ELQ4 463 aaPredicted RBP13.79□□□□□ -0.2
IFT43-210ENST00000555370 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
IFT43-210ENST00000555370 FGAP02671 866 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 EPS15P42566 896 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 MCM2P49736 904 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 TTLL5Q6EMB2 1281 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 UPF3BQ9BZI7 483 aaKnown RBP13.79□□□□□ -0.2
IFT43-210ENST00000555370 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 EPB41L4AQ9HCS5 686 aaPredicted RBP13.79□□□□□ -0.2
IFT43-210ENST00000555370 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
IFT43-210ENST00000555370 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 FAM155AB1AL88 458 aaPredicted RBP13.78□□□□□ -0.2
IFT43-210ENST00000555370 PRKAB2O43741 272 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 HUNKP57058 714 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 DYNLL1P63167 89 aaKnown RBP13.78□□□□□ -0.2
IFT43-210ENST00000555370 STRIP1Q5VSL9 837 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
IFT43-210ENST00000555370 NAPBQ9H115 298 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
IFT43-210ENST00000555370 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
IFT43-210ENST00000555370 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
IFT43-210ENST00000555370 USP17L3A6NCW0 530 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 USP17L4A6NCW7 530 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 ZNF213O14771 459 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 GAKO14976 1311 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 BAG3O95817 575 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 TDO2P48775 406 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 GIMAP6Q6P9H5 292 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.21
IFT43-210ENST00000555370 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 USP17L1Q7RTZ2 530 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 CERS5Q8N5B7 392 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 TTC14Q96N46 770 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 NEK1Q96PY6 1258 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 GLIS2Q9BZE0 524 aaPredicted RBP13.77□□□□□ -0.21
IFT43-210ENST00000555370 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
IFT43-210ENST00000555370 E7EWF7 191 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 FZD9O00144 591 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
IFT43-210ENST00000555370 RPS6KB1P23443 525 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 IARSP41252 1262 aaKnown RBP13.76□□□□□ -0.21
IFT43-210ENST00000555370 PPP4CP60510 307 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 HAND2P61296 217 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
IFT43-210ENST00000555370 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
IFT43-210ENST00000555370 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
IFT43-210ENST00000555370 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
IFT43-210ENST00000555370 YDJCA8MPS7 323 aa13.75□□□□□ -0.21
IFT43-210ENST00000555370 CPA1P15085 419 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms