RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 VSTM4Q8IW00 320 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 CARD6Q9BX69 1037 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 BTG4Q9NY30 223 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 SPTLC2O15270 562 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 PDE8BO95263 885 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 IVLP07476 585 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 MYL5Q02045 173 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 HLFQ16534 295 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 ELOA2Q8IYF1 753 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 GREM2Q9H772 168 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 NCOA5Q9HCD5 579 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 MRFAP1Q9Y605 127 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 ITGB4P16144 1822 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 A0A1B0GVL5 298 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 STX10O60499 249 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 ZNF202O95125 648 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 ARID4AP29374 1257 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 CASQ1P31415 396 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 MCAMP43121 646 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 UBASH3AP57075 661 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 GOLGA1Q92805 767 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 C8orf76Q96K31 380 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 FTOQ9C0B1 505 aaKnown RBP eCLIP12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 NWD2Q9ULI1 1742 aa12.26□□□□□ -0.45
MTHFD1-210ENST00000555252 MYH7P12883 1935 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 FAM237AA0A1B0GTK4 181 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 EXOC5O00471 708 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 CPLX1O14810 134 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 CDKL5O76039 1030 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 GPTP24298 496 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 NEK11Q8NG66 645 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 LPIN2Q92539 896 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 PPP2R2CQ9Y2T4 447 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 MAP2K7O14733 419 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 POLR3GO15318 223 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 TUBBP07437 444 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 HAND2P61296 217 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 PUM3Q15397 648 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 ALX1Q15699 326 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 FUT8Q9BYC5 575 aa12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-210ENST00000555252 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 LRP5O75197 1615 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 VGLL3A8MV65 326 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 SASH3O75995 380 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 TXLNAP40222 546 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 NOM1Q5C9Z4 860 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 SLC9C2Q5TAH2 1124 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 MYSM1Q5VVJ2 828 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 TMEM139Q8IV31 216 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 HSD3B7Q9H2F3 369 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
MTHFD1-210ENST00000555252 MYO1CO00159 1063 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 PPP6R2O75170 966 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SERPINC1P01008 464 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ACTN2P35609 894 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ANTXR2P58335 489 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ANGEL1Q9UNK9 670 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 MYH3P11055 1940 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SEC31AO94979 1220 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SLC5A1P13866 664 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 FGFR2P21802 821 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms