RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 UBE4AQ14139 1066 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 RASA3Q14644 834 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 TTC39BQ5VTQ0 682 aaPredicted RBP5.03□□□□□ -1.6
KTN1-220ENST00000555172 USPL1Q5W0Q7 1092 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 FAM43BQ6ZT52 329 aaPredicted RBP5.03□□□□□ -1.6
KTN1-220ENST00000555172 NLRP13Q86W25 1043 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 CNPY4Q8N129 248 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 IL17RAQ96F46 866 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 SMG9Q9H0W8 520 aaKnown RBP5.03□□□□□ -1.6
KTN1-220ENST00000555172 CHST12Q9NRB3 414 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 ABI2Q9NYB9 513 aaPredicted RBP5.03□□□□□ -1.6
KTN1-220ENST00000555172 TMEM63CQ9P1W3 806 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 TCEAL9Q9UHQ7 104 aa5.03□□□□□ -1.6
KTN1-220ENST00000555172 ESYT3A0FGR9 886 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 F8W735 103 aaPredicted RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 PPP1R12AO14974 1030 aaPredicted RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 GADD45BO75293 160 aaPredicted RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 EGFRP00533 1210 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 GNALP38405 381 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 CDKN1CP49918 316 aaPredicted RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 GYS2P54840 703 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 HS2ST1Q7LGA3 356 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 SLC51AQ86UW1 340 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 EPS8L3Q8TE67 593 aaKnown RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 GPRASP2Q96D09 838 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 SRCIN1Q9C0H9 1055 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 PRKAB1Q9Y478 270 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 KIAA1324LA8MWY0 1029 aaPredicted RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 CES1P23141 567 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 ETFBP38117 255 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 CHMP4BP1P59074 171 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 JAG1P78504 1218 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 MEI1Q5TIA1 1274 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 DHX32Q7L7V1 743 aaKnown RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 JAMLQ86YT9 394 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 HNRNPLLQ8WVV9 542 aaKnown RBP5.02□□□□□ -1.61
KTN1-220ENST00000555172 C8orf48Q96LL4 319 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 DEPDC7Q96QD5 511 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 COPRSQ9NQ92 184 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 FAM8A1Q9UBU6 413 aa5.02□□□□□ -1.61
KTN1-220ENST00000555172 LDHAP00338 332 aaKnown RBP5.01□□□□□ -1.61
KTN1-220ENST00000555172 GLB1P16278 677 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 LRRC41Q15345 812 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 TKFCQ3LXA3 575 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 SYCP2LQ5T4T6 812 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 PI16Q6UXB8 463 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 SLC39A13Q96H72 371 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 UBL7Q96S82 380 aaPredicted RBP5.01□□□□□ -1.61
KTN1-220ENST00000555172 TMX4Q9H1E5 349 aaPredicted RBP5.01□□□□□ -1.61
KTN1-220ENST00000555172 NPHS2Q9NP85 383 aa5.01□□□□□ -1.61
KTN1-220ENST00000555172 HMGB1P1B2RPK0 211 aaPredicted RBP5□□□□□ -1.61
KTN1-220ENST00000555172 EREGO14944 169 aa5□□□□□ -1.61
KTN1-220ENST00000555172 SASH3O75995 380 aa5□□□□□ -1.61
KTN1-220ENST00000555172 IGLV1-40P01703 118 aa5□□□□□ -1.61
KTN1-220ENST00000555172 POLR3DP05423 398 aaPredicted RBP5□□□□□ -1.61
KTN1-220ENST00000555172 SSBP05455 408 aaKnown RBP eCLIP5□□□□□ -1.61
KTN1-220ENST00000555172 BDNFP23560 247 aa5□□□□□ -1.61
KTN1-220ENST00000555172 KRBA2Q6ZNG9 492 aa5□□□□□ -1.61
KTN1-220ENST00000555172 ANKS3Q6ZW76 656 aa5□□□□□ -1.61
KTN1-220ENST00000555172 GALNT12Q8IXK2 581 aa5□□□□□ -1.61
KTN1-220ENST00000555172 LILRB2Q8N423 598 aa5□□□□□ -1.61
KTN1-220ENST00000555172 C1orf127Q8N9H9 656 aa5□□□□□ -1.61
KTN1-220ENST00000555172 MTA3Q9BTC8 594 aa5□□□□□ -1.61
KTN1-220ENST00000555172 TRIM55Q9BYV6 548 aa5□□□□□ -1.61
KTN1-220ENST00000555172 OSBPL7Q9BZF2 842 aa5□□□□□ -1.61
KTN1-220ENST00000555172 SLKQ9H2G2 1235 aaPredicted RBP5□□□□□ -1.61
KTN1-220ENST00000555172 TYW1Q9NV66 732 aaKnown RBP5□□□□□ -1.61
KTN1-220ENST00000555172 FRRS1LQ9P0K9 344 aa5□□□□□ -1.61
KTN1-220ENST00000555172 SFMBT1Q9UHJ3 866 aa5□□□□□ -1.61
KTN1-220ENST00000555172 RAXQ9Y2V3 346 aa5□□□□□ -1.61
KTN1-220ENST00000555172 J3QW42 95 aa5□□□□□ -1.61
KTN1-220ENST00000555172 EDN3P14138 238 aa5□□□□□ -1.61
KTN1-220ENST00000555172 DHX8Q14562 1220 aaKnown RBP5□□□□□ -1.61
KTN1-220ENST00000555172 TAF1CQ15572 869 aaPredicted RBP5□□□□□ -1.61
KTN1-220ENST00000555172 GDF6Q6KF10 455 aaPredicted RBP5□□□□□ -1.61
KTN1-220ENST00000555172 ZDHHC13Q8IUH4 622 aa5□□□□□ -1.61
KTN1-220ENST00000555172 TRPM4Q8TD43 1214 aa5□□□□□ -1.61
KTN1-220ENST00000555172 PKNOX2Q96KN3 472 aa5□□□□□ -1.61
KTN1-220ENST00000555172 HOMER2Q9NSB8 354 aa5□□□□□ -1.61
KTN1-220ENST00000555172 CNTN3Q9P232 1028 aa5□□□□□ -1.61
KTN1-220ENST00000555172 STOML1Q9UBI4 398 aa5□□□□□ -1.61
KTN1-220ENST00000555172 USP31Q70CQ4 1352 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 F6X3S4 739 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 USP17L7P0C7H9 530 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 MASP1P48740 699 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 ST13P50502 369 aaKnown RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 PTPN12Q05209 780 aaKnown RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 OS9Q13438 667 aaPredicted RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 BRDTQ58F21 947 aaPredicted RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 NBPF6Q5VWK0 638 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 NXPE4Q6UWF7 544 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 KIAA0907Q7Z7F0 614 aaPredicted RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 TMEM130Q8N3G9 435 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 ZNF512BQ96KM6 892 aaPredicted RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 NBPF4Q96M43 638 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 BCO2Q9BYV7 579 aa4.99□□□□□ -1.61
KTN1-220ENST00000555172 MRPL18Q9H0U6 180 aaKnown RBP4.99□□□□□ -1.61
KTN1-220ENST00000555172 CHRDQ9H2X0 955 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms