RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 AATFQ9NY61 560 aaKnown RBP eCLIP10.48□□□□□ -0.73
TDP1-210ENST00000554976 JAG2Q9Y219 1238 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 KLF18A0A0U1RQI7 1052 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 CHAF1AQ13111 956 aaPredicted RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 RALYLQ86SE5 291 aaKnown RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 CYP2D7A0A087X1C5 515 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 ORC4O43929 436 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 LDHBP07195 334 aaKnown RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 CDC27P30260 824 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 TDO2P48775 406 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 CCT2P78371 535 aaKnown RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 LARP1BQ659C4 914 aaKnown RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 KDM4AO75164 1064 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 PDCP20941 246 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 RCAN1P53805 252 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 RHBDL3P58872 404 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 MFSD6Q6ZSS7 791 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 SH3RF3Q8TEJ3 882 aaPredicted RBP10.47□□□□□ -0.73
TDP1-210ENST00000554976 STK32BQ9NY57 414 aa10.47□□□□□ -0.73
TDP1-210ENST00000554976 GADD45BO75293 160 aaPredicted RBP10.46□□□□□ -0.73
TDP1-210ENST00000554976 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
TDP1-210ENST00000554976 HMGN5P82970 282 aaKnown RBP10.46□□□□□ -0.73
TDP1-210ENST00000554976 ARPP21Q9UBL0 812 aaPredicted RBP10.46□□□□□ -0.73
TDP1-210ENST00000554976 ARFGEF1Q9Y6D6 1849 aa10.46□□□□□ -0.74
TDP1-210ENST00000554976 RANBP6O60518 1105 aaKnown RBP10.46□□□□□ -0.74
TDP1-210ENST00000554976 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.74
TDP1-210ENST00000554976 NBPF11Q86T75 865 aa10.46□□□□□ -0.74
TDP1-210ENST00000554976 ELP1O95163 1332 aa10.46□□□□□ -0.74
TDP1-210ENST00000554976 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 GSTO1P78417 241 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 MPNDQ8N594 471 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
TDP1-210ENST00000554976 RNF41Q9H4P4 317 aaPredicted RBP10.45□□□□□ -0.74
TDP1-210ENST00000554976 SUGT1Q9Y2Z0 365 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 GOLGA6L22H0YM25 854 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 CYP2D6P10635 497 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 KCNA3P22001 575 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
TDP1-210ENST00000554976 TRDNQ13061 729 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
TDP1-210ENST00000554976 ZNF445P59923 1031 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 FKBP1AP62942 108 aaKnown RBP10.44□□□□□ -0.74
TDP1-210ENST00000554976 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
TDP1-210ENST00000554976 TBC1D22AQ8WUA7 517 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 USP17L12C9JPN9 530 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 USP17L21D6R901 530 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 DEFB132Q7Z7B7 95 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 GAS2L3Q86XJ1 694 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 CHRNA5P30532 468 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 TMEM67Q5HYA8 995 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 CERS3Q8IU89 383 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
TDP1-210ENST00000554976 DDX11Q96FC9 970 aa10.44□□□□□ -0.74
TDP1-210ENST00000554976 VPS37CA5D8V6 355 aaPredicted RBP10.43□□□□□ -0.74
TDP1-210ENST00000554976 NT5C2P49902 561 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 FUT2Q10981 343 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 CHMP4CQ96CF2 233 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 USP17L8P0C7I0 530 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 BTDP43251 543 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 NOVP48745 357 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 MFSD14BQ5SR56 506 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 DPP8Q6V1X1 898 aaPredicted RBP10.43□□□□□ -0.74
TDP1-210ENST00000554976 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 ANKS1AQ92625 1134 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 SHISA4Q96DD7 197 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
TDP1-210ENST00000554976 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
TDP1-210ENST00000554976 DAGLAQ9Y4D2 1042 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
TDP1-210ENST00000554976 TNKSO95271 1327 aa10.43□□□□□ -0.74
TDP1-210ENST00000554976 PLIN4Q96Q06 1357 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 FLT1P17948 1338 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
TDP1-210ENST00000554976 FGD1P98174 961 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 ZSCAN23Q3MJ62 389 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 FAM43AQ8N2R8 423 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 ESR2Q92731 530 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 MINDY4BA8MYZ0 360 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 H0YIN7 160 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
TDP1-210ENST00000554976 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
TDP1-210ENST00000554976 BAG6P46379 1132 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 RAB11FIP4Q86YS3 637 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 ZKSCAN3Q9BRR0 538 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 MYL10Q9BUA6 226 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms